| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0822 |
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| Symbol | |
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| ID | 5057265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 915480 |
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| End bp | 917315 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640473091 |
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| Product | ABC transporter, transmembrane region, type 1 |
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| Protein accession | YP_001157677 |
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| Protein GI | 145593380 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0999493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGT CCGACCCGGC CAGCTACCCG GACACTCTCC CGGCCGACAT CATCGACGGC
AACGCGGCGC CGGTGACCAC CGGGCGCTCC GGCGCGCCGG AGCGGGTGGT GCTGCGGTTG
GCCCGCCCCT ACCTGAACCG GCTGCTCGGG GCGGGCCTGC TCGCCGCCGC CACCGAGTTC
GCCGCGCTGG CCCTGATGTC CACCGCGACG TGGCTGCTGA TGAGCGCCGC CGGCCGCCCG
CCGTTGGACC GGCTGACGGT GGCGATCGTC GCCGTCCGTG CGCTCGCCAT CGGGCGCGGC
GTCCTCCGCT ACACCGAGCG CCTGGCCGGG CACGACGCGG TGCTGCGGCT GGTCACCGAT
GTCCGTACCC GGGTCTTCGC CGCCCTGGCG GCCCGCCGGG ACAGCGCGGG GCAGCGCTCC
GGTGACGCAC TGAGCCGGCT GGTCTCCGAC GTGGAAGCCG TCCAGGACCT GCTGCTACGG
GTCCTCGTTC CGGCAACGGC AGCGGGGCTG GTGAGCGTAG TGGCCGTCGC CGCGACGATG
GTTGTCTCAC CGGCCGCCGC CGGAACGCTC GCGGTTGGAC TGCTGTTTGC GGGGGTCGCG
CTGCCGGTAC TGGCCACCGT GCTGACCCGA CGCGCCGCCG CCGAACTGGC ACCGCTACGC
GGCGCCCTGG CCACCGATGC CGTCGACCTC ACCCACGGCG CTGCCGACCT CGCCGCCTTC
GGGGCCACCG ATCGGGCCCG GGGCGCGGCA ACCGGCCGGA TCCAGCGGCT GGCCCGCATC
GAGCGGCGGC TGGCCGCGGC CGGCTTCGCA GTGGACGCGC TGGGTGTCCT GGTGGCCGGG
CTGACCGCCG GGGCGGTACT ACTGGTGGCC CTGGCCGACG GCGTAGCCGG GGTGCTGGTC
GGCGTCCTCG CCGTCGGCAC GCTGGTCGCC GTCGAGGTCG CGCTCGCCCT CGTCGGCGCC
GCCCGGCAGT GGACCGGCCT CCGCGCCGGC CTCACCCGGG TCGCCGCGCT GCTCCGGGAG
GCGCCGGCAG TAACCGCGGC CACACCCCCG CCGGGCCCCG CCCCCACCGC CGTGGAGATC
CGGTTCAGCG ATGTCACCGT CCGCTACCGC AGCGCGGGAC CGCCCGCCCT CGACCGGTTC
CGCCTGGACC TACCCCCCGG CCGGCGGGTC GCCGTGGTGG GGCCGAGCGG CGCCGGGAAG
AGCACCCTCG CCGCCGTCCT CACCGGCAGC GTACGGCCGG CAGCCGGACG AATCGTCCTG
GACGGACAGG ATCTGTCCGC CTACCCGGCG GAACTCCTCC CCCGCTTCGT CGGGGGCCTA
CTCGCCGAGG CGTACGTCTT CCACGCCACG GTCCGGGAGA ACCTGTTGCT CGGGCGCCCC
GGGGCGCCCG AGGAGGACCT GAACGCGGCG ACCGCCGCTG CTGGGCTGGC CCGTTGGGTA
CGGGAGCAGC CTGACGGCTG GGACACGGTG GTGGGTGAAG AGGGCGGGCA GCTCTCCGGC
GGCCAGCGAC AGCGTCTCGC GCTGGCCCGG GCGCTGCTCG CCGAGCCGGC GGTACTCGTG
CTCGACGAGC CGACCGAAGG GCTCGATCCG GTGGCCGCGG ACGACGTCCT GGCGTCCGTG
CTGGCCGCCA CCCCGGCCCA ACGCTCCGTG CTGCTGATCA GCCACCGGCT GCGCGGCCTC
GACGCGGTTG ACGAGATCCT GGTGCTCGAG TCTGGTCGGG TGGTCCAGCG CGGCCGGCAC
GCCGACCTGG TCGCGACCCC CGGCTGGTAC CGGGATCAGT GGCAGCTCCA GGAGGTTGCC
GAGCGCGGCT ATCTCGCTCT CGGCCCGCTG CCCTGA
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| Protein sequence | MSVSDPASYP DTLPADIIDG NAAPVTTGRS GAPERVVLRL ARPYLNRLLG AGLLAAATEF
AALALMSTAT WLLMSAAGRP PLDRLTVAIV AVRALAIGRG VLRYTERLAG HDAVLRLVTD
VRTRVFAALA ARRDSAGQRS GDALSRLVSD VEAVQDLLLR VLVPATAAGL VSVVAVAATM
VVSPAAAGTL AVGLLFAGVA LPVLATVLTR RAAAELAPLR GALATDAVDL THGAADLAAF
GATDRARGAA TGRIQRLARI ERRLAAAGFA VDALGVLVAG LTAGAVLLVA LADGVAGVLV
GVLAVGTLVA VEVALALVGA ARQWTGLRAG LTRVAALLRE APAVTAATPP PGPAPTAVEI
RFSDVTVRYR SAGPPALDRF RLDLPPGRRV AVVGPSGAGK STLAAVLTGS VRPAAGRIVL
DGQDLSAYPA ELLPRFVGGL LAEAYVFHAT VRENLLLGRP GAPEEDLNAA TAAAGLARWV
REQPDGWDTV VGEEGGQLSG GQRQRLALAR ALLAEPAVLV LDEPTEGLDP VAADDVLASV
LAATPAQRSV LLISHRLRGL DAVDEILVLE SGRVVQRGRH ADLVATPGWY RDQWQLQEVA
ERGYLALGPL P
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