| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0819 |
|---|
| Symbol | |
|---|
| ID | 5057262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 911248 |
|---|
| End bp | 911859 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640473088 |
|---|
| Product | protein of unknown function, ATP binding |
|---|
| Protein accession | YP_001157674 |
|---|
| Protein GI | 145593377 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2229] Predicted GTPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0908171 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACTTCG CAGGCTCTGA CGTGGCGCGT CCGCCGACCC CGAGCGGCCG CGTGACATCG
GCGAAGATTG TCATTGCCGG TGGATTCGGC GTCGGTAAGA CGACACTGGT CGGCTCGGTC
TCGGAGATCA CGCCGCTGAC AACGGAGGCG GTCATGACCT CCGCGAGTGT GGGCGTCGAC
GACAACCGGC AGGTGCCGGG AAAGTCGACG ACCACGGTGG CCATGGACTT TGGCCGGATC
ACCATCGACC GAGACCTGAT TCTGTACCTG TTCGGTACCC CCGGTCAGAC TCGGTTCTGG
TTCATGTGGG ACGAACTGGT CCGTGGTGCC ATCGGTGCGG TTGTCCTGGT TGACACCCGT
CGGCTCGCTG ACTGCTTTGC GGCGATCGAT TTCTTCGAGC ACCGGCGGCT GCCCTACCTG
GTGGCCATCA ACTGCTTCGA CGGGATGCAG TACCACAACC CGCAGGAGGT CCGGGACGCG
CTGGCAATCT CCAGCGACGT ACCGGTGGTG GCGTGTGACG CCCGCAACCG GGAGTCCACG
AAGCACGTAC TGATCTCGCT TGTCGAGTAC GTGCTCACCA TGCGTCGGTC CCGGGCTGTC
GCCCGGGCCT GA
|
|---|
| Protein sequence | MDFAGSDVAR PPTPSGRVTS AKIVIAGGFG VGKTTLVGSV SEITPLTTEA VMTSASVGVD
DNRQVPGKST TTVAMDFGRI TIDRDLILYL FGTPGQTRFW FMWDELVRGA IGAVVLVDTR
RLADCFAAID FFEHRRLPYL VAINCFDGMQ YHNPQEVRDA LAISSDVPVV ACDARNREST
KHVLISLVEY VLTMRRSRAV ARA
|
|---|
| |