| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0811 |
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| Symbol | |
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| ID | 5057254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 901318 |
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| End bp | 902022 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473080 |
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| Product | cytidine deaminase |
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| Protein accession | YP_001157666 |
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| Protein GI | 145593369 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.699286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATCG ACTGGGAGCG GCTGCGCGCC GCGGCGACCG AGGTGATGCG GCACGCGTAC
GTGCCGTACT CGAAGTTTCC GGTAGGGGCG GCCGCGCTGG TTGACGATGG TCGCGTCGTG
GTCGGCTGCA ACGTGGAGAA CGCGTCGTAC GGCATGGTGC TCTGCGCCGA GTGCGGTGTG
ATCTCCGCAC TGCAGGCTAC CGGCGGTGGA CGGATTGTCG CGCTCTCCTG CGTCGATGCC
ACCGGGGAGC CGCTGATGCC GTGCGGGCGT TGCCGGCAGC TGCTCTGGGA GCACGGCGGC
CCGGAGTGTC TGATCGAGGC GAAGGGTGGA GCGCTACGGA TGGCCGAGCT GCTGCCGCAC
GCCTTCGACG TGACGGATCT GGAGGCGGTG ACCGGGGAGG ATCCGGTCCC GGTGGTGCCG
GAGCGGCTGG CTGCCTGGCG GGGGCGCGGG ACGGTCTTTG TGCACCCGGA CCTGTCGGCG
GGGCAGCAGG TGTGGACGGC GTACTGGGAA CGCTCGACGG GGGAGGCCGG CGACGGCGAG
ACCGGCGTTC TCGAGGAGGG CCCGAGCTGG GACGATCCAG CGGAGGCGAT TACCTGGGGG
CTGGCCCGGG TGCCACGGGT CGTGGTGGTG GACGCGGCCG GCACGATCTT CTGGGCGGGT
GAGGGCGAGC CGCCGTTGGA GATCCCGATC CGGTGGACTG GCTGA
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| Protein sequence | MEIDWERLRA AATEVMRHAY VPYSKFPVGA AALVDDGRVV VGCNVENASY GMVLCAECGV
ISALQATGGG RIVALSCVDA TGEPLMPCGR CRQLLWEHGG PECLIEAKGG ALRMAELLPH
AFDVTDLEAV TGEDPVPVVP ERLAAWRGRG TVFVHPDLSA GQQVWTAYWE RSTGEAGDGE
TGVLEEGPSW DDPAEAITWG LARVPRVVVV DAAGTIFWAG EGEPPLEIPI RWTG
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