Gene Strop_0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0797 
Symbol 
ID5057240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp885304 
End bp886365 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content67% 
IMG OID640473066 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001157652 
Protein GI145593355 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATC CCGGGGTTGC TGACAGAATT GCCAGCATGT CCAAGGTACC CGCTCAACCG 
CGCGTGTTCT CTGGTATTCA GCCGACCGCC GATTCGTTCC ATCTCGGCAA CTACCTGGGC
GCAGTCCGGC ACTGGGTGGC GTTGCAGGAG ACGCACGACG CCTTCTACTG CGTGGTTGAT
CTGCATGCGA TCACCGCCGG GCACGACCCC CGGGTGTTGG CACAGCGGTC CCGGGTGGCC
GCCGCGCAGC TTCTCGCGGC GGGGCTGGAC CCGGAGCGTT GCACCCTGTT CGTGCAGTCC
CAGGTGCCCG AGCACGCGCA GTTGGCCTGG GTGTTGGGGT GCCTCACCGG ATTCGGCGAG
GCGGGCCGGA TGACCCAGTT CAAGGACAAG TCGCAGAAGC AGGGCAACGA GCGGGCCAGC
GTCGGCCTGT TCACGTACCC GATCCTCCAA GCGGCCGACA TCCTTCTCTA CCAGGCGGAC
GCGGTGCCGG TCGGCGAGGA CCAGCGGCAG CACCTGGAGC TCAGCCGCGA CCTGGCGCAG
CGGTTCAACA CGCGGTTCGG GTCGACGTTC ACGGTTCCCG CGGCGCACAT CGTCAAGGAC
ACGGCGAAGA TCACGGACTT GCAGGACCCG ACGGCGAAGA TGTCGAAGTC GTCCTCCTCA
CCGGCGGGTA TCGTTCTGTT CCTCGAGGAT GCGGCCCGGT CGGTTAAGAA GATCCGTTCG
GCCGTCACCG ACACCGGCCG GGAGATCGTC TTTGATGTCC AGCAGAAACC GGGTGTCTCC
AACCTGCTGA CGATCTATTC GGCGCTCTCT GGCCGAAGCA TTGACGATCT GGTCGGCGCC
TACGCGGGCA AGGGCTACGG CGACCTGAAG AAGGACCTCG GCGAGGTGGT ACGCGACTTC
GTGACGCCGA TCCAGGACCG CACCCGCGGC TACCTCGACG ACCCGGCCCA GCTCGACAAG
CTGCTCGCCG CTGGGGCGCA GAAGGCGCAG GCGGTGGCGG CACCGACCCT ACAGGCCGTG
TACGAGCGGG TGGGCTTCTT CCCACCGGTG CGCGGCGAGT AG
 
Protein sequence
MTDPGVADRI ASMSKVPAQP RVFSGIQPTA DSFHLGNYLG AVRHWVALQE THDAFYCVVD 
LHAITAGHDP RVLAQRSRVA AAQLLAAGLD PERCTLFVQS QVPEHAQLAW VLGCLTGFGE
AGRMTQFKDK SQKQGNERAS VGLFTYPILQ AADILLYQAD AVPVGEDQRQ HLELSRDLAQ
RFNTRFGSTF TVPAAHIVKD TAKITDLQDP TAKMSKSSSS PAGIVLFLED AARSVKKIRS
AVTDTGREIV FDVQQKPGVS NLLTIYSALS GRSIDDLVGA YAGKGYGDLK KDLGEVVRDF
VTPIQDRTRG YLDDPAQLDK LLAAGAQKAQ AVAAPTLQAV YERVGFFPPV RGE