| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0790 |
|---|
| Symbol | |
|---|
| ID | 5057233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 878469 |
|---|
| End bp | 879170 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640473059 |
|---|
| Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
|---|
| Protein accession | YP_001157645 |
|---|
| Protein GI | 145593348 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
|---|
| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGAGG TAAAGATCAG CGCCGAGCCC CGTACCGAGT TCGGCAAGGG TGGTGCCCGT
CGTACCCGCC GGGCCGGCAA GGTGCCTGCC GTGCTGTACG GCCACGGCGA GAAGCCCAAG
CACATCGCGC TGCCAGCCCG GGAGTTCGCT GCGGCGATCC GGCGCGGTGG TGCCAACCAG
CTCTTCGCGA TCGACATCAG CGACGGCACG CAGGTGCTGG CGTTGCCGAA GGCGATCCAG
CGGGATCCGA TCAAGGACAC CTTCGAGCAT GTGGACCTGC TGCTTGTTCG CCGTGGCGAG
CAGGTCACGG TTGAGGTCCC GGTGCAGCTG GTCGGTGAGG CCGCGAAGGG CACGCTGATC
GTGCACGACC ACGACAGCCT TTCGGTGACC GCTGACGCCA CCAACGTGCC GGACCACCTC
GACGCCAGCA TTGAGGGCCT GGAGGCGGGT TCGCAGGTGG CCGCCGCCGA CGTGCAGCTG
CCGGCCGGAG TCGAGCTGGC CACCGACCCG GAGCTGCCGG TCGCCGCGGT GACCGCCGCC
CCGACCGAGG AGCAGCTCGA AGCCACGCTG CCGGAGGTGG AGGAGGCCGC CGCCGAGGCC
GAGGCCGTGG TCGGCGAGGT CACCGAGGGC TCGGAGGGCG CCGAGGCCGG GGCTCCGGCC
GCCGAGCAGG AGGCGGGTGC CGAAGCGAAG GCCGAGGCCT GA
|
|---|
| Protein sequence | MSEVKISAEP RTEFGKGGAR RTRRAGKVPA VLYGHGEKPK HIALPAREFA AAIRRGGANQ
LFAIDISDGT QVLALPKAIQ RDPIKDTFEH VDLLLVRRGE QVTVEVPVQL VGEAAKGTLI
VHDHDSLSVT ADATNVPDHL DASIEGLEAG SQVAAADVQL PAGVELATDP ELPVAAVTAA
PTEEQLEATL PEVEEAAAEA EAVVGEVTEG SEGAEAGAPA AEQEAGAEAK AEA
|
|---|
| |