| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0789 |
|---|
| Symbol | |
|---|
| ID | 5057232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 877192 |
|---|
| End bp | 878172 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640473058 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_001157644 |
|---|
| Protein GI | 145593347 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGCA TCGTCGCCGA AAACCGCAAG AGCCTGATGC TCTTCTCCGG GCGTGGCTTT
CCGGAGTTAG CCGAGGAGAT CGGTGAGGTG CTTGGGGTCG CCCCGACACC GGCCGACGCC
TACGAGTTCG CCAACGGGGA GATCTTCGTC CGCTACAAGG ACTCGGTGCG GGGTTCGGAC
GCCTTCGTGG TGCAGTCCGT CACGCACGGG GTCAACACCT GGGTCATGGA GACCCTGATC
ATGATCGACG CGTTGAAGCG TGGGTCGGCC AAGCGGATCA CCGTGGTCCT GCCCTTCTAC
CCGTACTCGC GGCAGGACAA GAAGCACCGG GGCCGGGAGC CGATCTCGGG CCGGCTGATC
GCGGACCTGC TGAAGACCGC CGGCGCGAAC CGGATCCTCA CCGTGGATCT GCACACCGCC
CAGATCCAGG GCTTCTTCGA CGGCCCGGTG GACCATCTCT TCGCGATGGA CGTGCTCGCC
GAGTCGGTGG AGCGTCGGTA CGCGGGGCGC CCGATGACGG TGGTCGCCCC GGATTCGGGT
CGGGTCCGGG TCGCCGAGCG GTGGACCGAC CGGCTGGGCG GCTGCCCGCT GGCGTTCATC
CACAAGACCC GGGATCCCTC GAAGCCGAAC CAGGTGGTGG CGAACCGGGT GGTCGGTGAG
GTCGAGGGCC GGGTCTGCCT GATCGTCGAC GACATGATCG ACACGGGTGG CACGATCACC
AAGGCTGCGG AGATCCTCAA GGAGTTGGGT GCGGCCGAGA TCGTCGTCGC CTCCACCCAC
GCGCTCTTCT CGGATCCGGC GACCGAGCGG CTGAAGAACA GCCCGATCAG CGAGGTGCTG
GTGACCAACA CGTTGCCGCT GCCGTCGGAG AAGCAGCTCG ACAAGGTCAC CGTCCTGTCG
ATCGCACCGC TGCTGGCCCG GGCGATCCGT GAGGTCTTCG ACGACGGCTC GGTGACCACC
CTGTTCGGTG GCCTGAGCTG A
|
|---|
| Protein sequence | MGSIVAENRK SLMLFSGRGF PELAEEIGEV LGVAPTPADA YEFANGEIFV RYKDSVRGSD
AFVVQSVTHG VNTWVMETLI MIDALKRGSA KRITVVLPFY PYSRQDKKHR GREPISGRLI
ADLLKTAGAN RILTVDLHTA QIQGFFDGPV DHLFAMDVLA ESVERRYAGR PMTVVAPDSG
RVRVAERWTD RLGGCPLAFI HKTRDPSKPN QVVANRVVGE VEGRVCLIVD DMIDTGGTIT
KAAEILKELG AAEIVVASTH ALFSDPATER LKNSPISEVL VTNTLPLPSE KQLDKVTVLS
IAPLLARAIR EVFDDGSVTT LFGGLS
|
|---|
| |