| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0783 |
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| Symbol | |
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| ID | 5057225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 870378 |
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| End bp | 871325 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640473051 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001157638 |
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| Protein GI | 145593341 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.234509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAGG CATGGCGACC GGAGGATGAC GAACCGCGAG GTGCCAGCGG GCCGGTCCGC
GTACGGGTCC CCGCCAAGAT CAACCTGCAC CTGGGGGTGG GGCCGCTACG CCGGGACGGC
TATCACGAGC TGAACACGGT CTACCATGCG ATCTCCATTC ACGACGAGTT GACTGCCCGC
CGGGGCGACA CCCTCACTCT GACGATGGAG GGCGAGGGGG CCGGCGAACT GGCCCTGGAC
GAGTCAAACC TGGTCATTCG CGCCGCCCGC GCCCTCGCCG GCTCCACCGG CGTGCCGCCG
CACGCCCGGC TGCACCTGCG CAAGCAGATC CCACTGGCCG GTGGGCTCGC CGGAGGTAGC
GCCGATGCCG CCGCCGCGCT GGTTGCCTGC GATGCCCTCT GGGGGACCGG GCTGACTCGT
GACGAACTGG CGGAGATCGC CGCCGGCCTC GGTTCCGACG TGCCGTTCCT GATCCACGGG
GGCACCGCCC TCGGCACCGG CCGGGGAGAG GCGGTCAGTC CGGTCCTGGC CCGGCCGACC
GTCTGGCACT GGGTCGTCGC GGTCGCCGAC GGCGGCTTGT CCACGCCGGT CGCGTACCGG
GAACTCGACC GGCTCCGAGC TGCCGGGGCC GCCGGCCCCC CGCTCGGCAG CACCGACACC
CTCCTCGCCG CGCTACGGCA GCCCGACCCC CGGGTGCTCG CCGCGGCCCT CGGTAACGAC
CTCCAGGACG CCGCGCTCGC ACTGCGGCCC GCCCTGGCCG CCACCCTGAA GGCGGGTGAG
GCGGCGGGAG CGCTCGCGGG CATCGTCTCC GGCTCCGGGC CGACCTGTGT CTTCCTCGCC
GCCGGAGCGG CCGACGCGGA GCGGATCGCC GCCGAGTTGA GCGCCCTCGA CGTGTGCCGA
CAGGCCCGCA CCGCGCACGG CCCGGTCGCC GGGGCCCGGA TCGGCTGA
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| Protein sequence | MTEAWRPEDD EPRGASGPVR VRVPAKINLH LGVGPLRRDG YHELNTVYHA ISIHDELTAR
RGDTLTLTME GEGAGELALD ESNLVIRAAR ALAGSTGVPP HARLHLRKQI PLAGGLAGGS
ADAAAALVAC DALWGTGLTR DELAEIAAGL GSDVPFLIHG GTALGTGRGE AVSPVLARPT
VWHWVVAVAD GGLSTPVAYR ELDRLRAAGA AGPPLGSTDT LLAALRQPDP RVLAAALGND
LQDAALALRP ALAATLKAGE AAGALAGIVS GSGPTCVFLA AGAADAERIA AELSALDVCR
QARTAHGPVA GARIG
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