| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0782 |
|---|
| Symbol | ksgA |
|---|
| ID | 5057224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 869407 |
|---|
| End bp | 870276 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640473050 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_001157637 |
|---|
| Protein GI | 145593340 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.13736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGTC TCCTCGGCCC GGCGGAGATC CGGGACCTCG CCGCCCGCCT CGGCGTCGCT
CCCACCAAGC GGCTCGGCCA GAACTTCGTC CACGACCCCA ACACGGTGCG GCGGATTGTC
ACCACCGCCG GCCTGACCGC CCAGGACGTG GTGCTGGAGG TCGGTCCGGG CCTTGGCTCG
CTCACCCTCG CGCTGCTGCC GGCCGCCGCG CACGTGCACG CCGTCGAGAT CGATCCGGTC
CTCGCCGCCG CCCTGCCGGA GACCGCTGCC CGGCACGCCG GCCCCGCCGC GGATCGGCTC
TCGGTGCACC GCGCCGACGC GCTCCGGGTC ACCGCCGGGC AACTCGCCGA TCCCGCGCCG
ACCGCGTTGG TCGCCAACCT GCCGTACAAC GTCGCCGTAC CGGTGGTGCT GCACCTGCTC
GCCGAGTTGC CGACGCTGCG GCACGGCCTG GTCATGGTGC AGAAGGAGGT CGCCGACCGG
CTCGTCGCCG GTCCGGGTTC CCGGGTGTAC GGCGTGCCGT CGGTCAAACT CGCCTGGTAC
GCCCGCGTCC ACGCTGCCGG GAAGGTTCCG CCGAACGTGT TCTGGCCGGT GCCGAACGTC
GACTCCGGTC TTGTCGCCTT CACCCGTCGT GAATCGCCGG GAGTGGGCGT TTCCCGGGAG
CGGATCTTCG CGGTGGTGGA CGCCGCCTTC GCCCAGCGTC GCAAGACCCT TCGCGCGGCC
CTGGCCGGCT GGGCCGGCGG CGCGGATCGG GCGGCCGCGG TGCTCACCGC CGCCGGAGTG
GACCCCGGCG CCCGCGGGGA GGCGCTCACG GTCGAGCAGT TCGCCGCCAT CGCCGCGTCG
GCCCCGGCCG GCACTCCCAC CGGGCAGTAG
|
|---|
| Protein sequence | MTGLLGPAEI RDLAARLGVA PTKRLGQNFV HDPNTVRRIV TTAGLTAQDV VLEVGPGLGS
LTLALLPAAA HVHAVEIDPV LAAALPETAA RHAGPAADRL SVHRADALRV TAGQLADPAP
TALVANLPYN VAVPVVLHLL AELPTLRHGL VMVQKEVADR LVAGPGSRVY GVPSVKLAWY
ARVHAAGKVP PNVFWPVPNV DSGLVAFTRR ESPGVGVSRE RIFAVVDAAF AQRRKTLRAA
LAGWAGGADR AAAVLTAAGV DPGARGEALT VEQFAAIAAS APAGTPTGQ
|
|---|
| |