| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0758 |
|---|
| Symbol | |
|---|
| ID | 5057200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 841616 |
|---|
| End bp | 842026 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640473026 |
|---|
| Product | roadblock/LC7 family protein |
|---|
| Protein accession | YP_001157613 |
|---|
| Protein GI | 145593316 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA CAATCGGTCT GACCTTGAAT TCGCAACTGT CGGCAGTGCT CGACGGGCTG
GCCAAGCAGA TCCCCGCTGT GGCACACGTT GTCGCGGTGT CCGAGGACGG TCTGCTGCTG
GCCAGCACCG CTGGTCTGGA TCGCGACCGG GGCGACCAAC TCGCCGCGAT TGTCTCCGGC
CTGGTCAGCC TCGCCCGCGG CGCCACCGAC CTGCTGGAGA CCGGTGGTGT GCAGTTTCAG
CTGCTGATGA TGCGGGACGG GATCCTCGTC GTGCAGCAGG TGCCCGACGG GTCCTCGCTG
GCGGCCCTGG CCCGCACCGA CTGCGACCCC TCGCTGGTCG CCTATGAGCT GGCGGCACTC
GCGGCGCGAA TCGGTGAGCA GGTCAAGCCG GGACCACGCG TGGCGAGCTG A
|
|---|
| Protein sequence | MSGTIGLTLN SQLSAVLDGL AKQIPAVAHV VAVSEDGLLL ASTAGLDRDR GDQLAAIVSG
LVSLARGATD LLETGGVQFQ LLMMRDGILV VQQVPDGSSL AALARTDCDP SLVAYELAAL
AARIGEQVKP GPRVAS
|
|---|
| |