| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0744 |
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| Symbol | |
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| ID | 5057185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 824544 |
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| End bp | 826805 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640473011 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001157599 |
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| Protein GI | 145593302 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.165088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.416995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGCAT CGCAAGCATC GGCCGCGAAG TCCCGGGGGG ACCGAGTGAC ACTACGGGCA
CGCCTAACCG CAGCCTTCAC CATGGTGGTG CTCGGTCCGG TGCTGGTCGG GGCGTACTTC
GTGGGATCGG CCGTGACCAG CGCCGATCGA AGTCGGTCCG CCGACCGGCT CGCGGCTGCC
GCGACCGCCG TCCGAACCGC GGTCGACGCG CTCTGCCAGC AGCTGCGGGC CGCCGCGGAG
GCGGTGGCCC TCGCCGACGA CCGGGCGGTC GCCGCGCGGA AGATGGTCGA TCGGGGTCTC
GCCGCCGCCG TACGGGTCAC CGACATCGAG GGGCGGGTGC TCCACGCCAC CACGCCGCTG
CCCGCTGAGC CCTGGCGGGA CTGCGCGGGG CGTACCTCGG CCGGTGCACC GCCTGGTGCG
TTGGCCGTCC GGGTGGACCT GCGGGACGCC ACCGGGGTTC CACGGGGCAC GGTCACCGCC
GCGCAGCCGG TCGACCCCGC GTTCGTGGCG CGGCTGGCGG TGCTCACCGG GGCGGCGGTC
ACCCTGCTCG GCGGCCCGGA CACGGCCAGC CAACTTCGGC ACACCACCGA GTCGGCGGGA
GTACGGGAGG CGGTACTCGG TGCCGTCGGT GGAGTGGACG GCGAGCAGGT CGTGGGCACC
GTCGACGGTC GGTACGTGCG GCGGGTCGGT CCGTCGGACG GGCAGCCGCT GTCGCTGGTG
CTCTCCGTTC CGAGCGACCG GCCCCCCAGC CTGTACGTCG CTCTGGTCGC CGTCGTGCTG
TTGGCCGTGC TGTTGGCGGT GGTCGTCGCC GGGCGGCTGG CCCGGGCCAC CAGCCGGCCC
TTGGCCGAAC TGGCGGGAGC GGTGGACCGC GTGGCCCGGG GCGACCTGAC CGTGCGGGTG
CCGGTGCGGA GCCGGGACGA GATCGGGCGG CTGGCCGGAG CGTTCAACCG GATGACCCGG
GAGACCGGCA CCTACGTCGC CGCACTGACC AGCAGCCGGG ACCAACTGCG CGGACACCTG
GAAGTGCTGG GGGACACCCT GGCCAGCACC CATGACCTGC AGCGCATCCT GCGGGTTATC
TTGCACAGCG CGATCGCGGC GACCGGTGCC CGCGCGGGGG CCGTGCTCCT CGTCGATTCG
GGTGGGCTGC TGGTCGCGCA GGCCACCGAA GGGCTCGAGG TGCCGGCCGG TGGGCCGGGG
CCGAATCGGG TCCCGCTCGG CGACCTGGTG GGCGCGGTTA CGGTCAGCGG AGAGGCGCGC
CGCGGCCGGG TGGAGCCGTC CACGGCGTCG CCGGGGGAGC CCCCCTGCCG GACGTACATC
GCGGTGCCCT TCGCAGCCCC GCGGGACGGC GGCGCCACGC GGGCCGACGG CGCGTCCCCC
TCCGTGGGTG GCCCGCCGGA CGGTGCGGCA CCGGCGACGT TCGGCGTGCT CGCCCTCTAC
GATCGGCTCG CTGGGGAGGA ATTCGACGAC GACGACCTTG TCACGCTGCG CACCTTCGCC
GGACATGCCG CGGTGGCGGT GGACAACGTC CGGGTGCACG AGGAGACCCA GCGGCTGTCG
CTGACGGATC CCCTCACCGG CCTCTGGAAC TACCGCTATC TGCGCCAGTC GCTTCGCCGC
GAGGTGGAAC GGGCCACCCG GTTCGGTCGG ATGCTCAGCG TCCTCGCCCT CGACCTGGAC
CGCTTCAAGC ACGTCAACGA CACCCACGGG CACGCCGCCG GGGACCGGGT GCTGGTCGAG
TTCGCCCGGC GGATCCGCGG CGAGATCCGT GAGGTCGACC TCGCCTTCCG GTTGGGGGGA
GAGGAGTTCG TGGTGCTGCT ACCGGAGACC GACGTCGTGG GCGCGGCCAT CGTCGCGGAG
CGGCTCGGTG CGGCGGTGCG GGACACCCCG ATCGCTGTCG ACGGGCTGGG CGTCCCGGTC
CTGGTGCCGG TGACCGTCTC CATTGGTGTC GCGGTCCACC CCGACCACGG CGGCACCGGA
CAGGAGGTGC TCAATGCCGC CGACGAAGCC CTGTACGTGG CGAAAGCCAG CGGTCGAGAC
ACCTGCCGGG TCGCCCGGGC GGCGAAGGCA CCCGCGCTAC CGGTGCCGGT GTGCTCGGAC
GAGGGGACGC CTCCAGCCGA CGCGCGGCAT GAGACGTCGG AGCAGGCCGG TGCGGCCGGC
GGGAACGGGT CGGAGACCGA CGTGGCAGCG GGGTCCGGGG CGGTCACTCC CAGCGGCGCG
ACTTCCGGTC CTCACCCGCC ACGACAGAGC CGTGGCCGAT AG
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| Protein sequence | MSASQASAAK SRGDRVTLRA RLTAAFTMVV LGPVLVGAYF VGSAVTSADR SRSADRLAAA
ATAVRTAVDA LCQQLRAAAE AVALADDRAV AARKMVDRGL AAAVRVTDIE GRVLHATTPL
PAEPWRDCAG RTSAGAPPGA LAVRVDLRDA TGVPRGTVTA AQPVDPAFVA RLAVLTGAAV
TLLGGPDTAS QLRHTTESAG VREAVLGAVG GVDGEQVVGT VDGRYVRRVG PSDGQPLSLV
LSVPSDRPPS LYVALVAVVL LAVLLAVVVA GRLARATSRP LAELAGAVDR VARGDLTVRV
PVRSRDEIGR LAGAFNRMTR ETGTYVAALT SSRDQLRGHL EVLGDTLAST HDLQRILRVI
LHSAIAATGA RAGAVLLVDS GGLLVAQATE GLEVPAGGPG PNRVPLGDLV GAVTVSGEAR
RGRVEPSTAS PGEPPCRTYI AVPFAAPRDG GATRADGASP SVGGPPDGAA PATFGVLALY
DRLAGEEFDD DDLVTLRTFA GHAAVAVDNV RVHEETQRLS LTDPLTGLWN YRYLRQSLRR
EVERATRFGR MLSVLALDLD RFKHVNDTHG HAAGDRVLVE FARRIRGEIR EVDLAFRLGG
EEFVVLLPET DVVGAAIVAE RLGAAVRDTP IAVDGLGVPV LVPVTVSIGV AVHPDHGGTG
QEVLNAADEA LYVAKASGRD TCRVARAAKA PALPVPVCSD EGTPPADARH ETSEQAGAAG
GNGSETDVAA GSGAVTPSGA TSGPHPPRQS RGR
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