| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0718 |
|---|
| Symbol | |
|---|
| ID | 5057159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 803076 |
|---|
| End bp | 803945 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640472985 |
|---|
| Product | PhzF family phenazine biosynthesis protein |
|---|
| Protein accession | YP_001157573 |
|---|
| Protein GI | 145593276 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
|---|
| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.186354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCC TGGCCTACGA GATCGTGGAC GTCTTCACCG ATCGCCCCTT TGCCGGTAAC
CCCCTGGCGG TGGTGTTCGG GGCCGACGGG CTGGCCACGG AGCAGATGCA GGCGCTCGCA
CTGGAGTTCA ACCTTTCCGA GACGGTGTTC GTGCTCCCAC CCACCCGGGC CGACGCCACC
TATCGGGCGC GAATCTTCAC CCCGGTTGAC GAGTTGCCGT TCGCCGGCCA TCCGAGTGTC
GGCGCGGCGG CCACCGCCAG CCGGCGTGGT CTCTTCGCCG CCGGCCGGGT ACGGCAGGAG
TGCGGCGCCG GTGTGCTGCC GATCGAGGTG ACCGCGACCG GCGCGACGCT GACCGGAGGT
ACACCGACTC TCGGCCCCGA ACTGGATCCG GGGCCGTTGC TGGAGATGGT CGGCCTCTCC
GAGGCCGACC AGACCGGCCC GGCGCCCCGG GTGGCCGGCT GCGGCCTGGA ATTCCCGTAC
CTACCGGTCC ATCCACACGC GGTGCCACGC GCCCAGCTGA ATCCGGGGGC AGCGCAGCGG
TACGGAGTGG AGCACGTCGT GGTCTTCTCC TGGGATGCCG AGTCGCGGAC CACGCACACC
CGGGTCTTCG TCCCCGGGTT GGGTGTGCCG GAGGATCCGG CGACCGGGTC GGCCGCCCTG
GGGCTGGGGG TGTGGTTGGT GGCCACAGGT CTGCTACCCG GTGTGGGCCG ATCCGCGTAC
ACCGTCCGTC AGGGCAGCGA GATTCGTCGG CCGTCCTCGT TGGCCTGCAC GGTTACCGCG
GCCGACGGGG CTGCCCTCGG CGCTACCGTC GCCGGCGGGG TGGCACCGGT GGCCCGGGGC
GAGATTGTGA TCCCGCCGTT CGTCGGCTGA
|
|---|
| Protein sequence | MSTLAYEIVD VFTDRPFAGN PLAVVFGADG LATEQMQALA LEFNLSETVF VLPPTRADAT
YRARIFTPVD ELPFAGHPSV GAAATASRRG LFAAGRVRQE CGAGVLPIEV TATGATLTGG
TPTLGPELDP GPLLEMVGLS EADQTGPAPR VAGCGLEFPY LPVHPHAVPR AQLNPGAAQR
YGVEHVVVFS WDAESRTTHT RVFVPGLGVP EDPATGSAAL GLGVWLVATG LLPGVGRSAY
TVRQGSEIRR PSSLACTVTA ADGAALGATV AGGVAPVARG EIVIPPFVG
|
|---|
| |