| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0697 |
|---|
| Symbol | |
|---|
| ID | 5057138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 783024 |
|---|
| End bp | 784061 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640472964 |
|---|
| Product | TrkA domain-containing protein |
|---|
| Protein accession | YP_001157552 |
|---|
| Protein GI | 145593255 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.793307 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGGCGG GGCGAACGGT GATCCATTTC CCGGCGCAAC GGCGCGATCC GCTGAGCGCG
TTGAGTCTGC GGTTGGCCGC GGCCCTCGGG CTCATCCTCG CCAGCGTCGC CGTGGTGTGG
TTGGACCGGG ACGGCTATCG GGACGCCAAC CGCGACTCGG CCGGGCTGAG CCTTCTCGAC
TGCTTCTACT ACGTCGTGGT CTCCCTCTCC ACCACGGGAT ACGGCGACAT CGCCCCGGTC
TCCGAGTCGG CCCGCCTGCT CAACGTCCTC TACATCACGC CCGCCCGGGT CATATTTCTG
ATCATCCTGG TCGGCACCAC CCTGGAAGTC CTGACCGAGC AGTACCGGAC CGGCCTTCGC
CTGTCGCGGT GGAGGAGAGC TGTGAAGGAC CACGTCATCA TCTGCGGCTA CGGCACCAAG
GGCCGCAGCG CGATCTCCGC CCTGCTCGAG AACGGTTTCG ACAAGTCCAG GATTGTGGTG
GTCGAGCGCA GCGGCGCTGC CCTACGGCAG GCCACCTCGG CCGGTCTGGT GGCGATCGAG
GGATCGGCGA CCCGCTCGGC CACCCTCAAC GAGGCACACA TCCGGACCGC CAAGGCAGTG
ATCATCGCGA CCGACAGTGA CGACGCCGCG GTGTTGGTGG CGCTGACCGT CCGGCAGCTC
ACCGCCGGAC AGGTGCGGAT CATCGCCGCG GCCCGGGAAG CGGAGAACGC CCCGCTGCTC
AAACAGAGCG GCGCCCATCA CGTGATCGTC TCGTCGGCGA CCGCCGGTCG GCTGCTGGGC
CTCTCCACCT CCGCGCCGCC GCTGATCGAG GTCGTGGAGG ATCTGCTCAC ACCCGGTCAG
GGTATGGCGC TCGCGATGCG TTCGGCCGAG CGGCACGAGG TCGGCCGTTC CCCCCGCGAG
CTGGACACCC TCGTCATTGC GCTCGTGCGG CGGGGCAAGG TGGTCACCCT CGCCGATCGG
GCCGGTGGGG TCATCGAAAC CGGCGACATG CTCGTGCACG TCCGCGACGA CCGTCGGACC
TCCACGCCGG TGTCCTGA
|
|---|
| Protein sequence | MWAGRTVIHF PAQRRDPLSA LSLRLAAALG LILASVAVVW LDRDGYRDAN RDSAGLSLLD
CFYYVVVSLS TTGYGDIAPV SESARLLNVL YITPARVIFL IILVGTTLEV LTEQYRTGLR
LSRWRRAVKD HVIICGYGTK GRSAISALLE NGFDKSRIVV VERSGAALRQ ATSAGLVAIE
GSATRSATLN EAHIRTAKAV IIATDSDDAA VLVALTVRQL TAGQVRIIAA AREAENAPLL
KQSGAHHVIV SSATAGRLLG LSTSAPPLIE VVEDLLTPGQ GMALAMRSAE RHEVGRSPRE
LDTLVIALVR RGKVVTLADR AGGVIETGDM LVHVRDDRRT STPVS
|
|---|
| |