Gene Strop_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0687 
Symbol 
ID5057128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp772164 
End bp773729 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content66% 
IMG OID640472954 
Productamino acid adenylation domain-containing protein 
Protein accessionYP_001157542 
Protein GI145593245 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID[TIGR01733] amino acid adenylation domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC GTACTCTCTA CGACTGGTTC CGGACCTCGG CCCGGCTGCA CCCAGATAAC 
GTGGCGATCG AGGTCACCTC GGACGCACTG ACTTACGCCG AGTTGCGGGC CGCAACCCAG
CGGTTGTCGG CCGATATGCG GCGGATGCTG GGGCGGTCAC CCCGACGGGT GGGGCTGCTC
ACCTCCCGCA GCCTTGTCGG CTACATCGCG TACCTGGCCG CCCTGCGGCT GGGTGCGACA
GTGGTACCGC TCAATCCCGC TAACCCGGCG GCCCGCAACC TCGCCATCGC CGACGAGGCA
ACCCTTGACC TGGTCGTGGT CGACGATAGC TCGGGCGACG GACTCGCTGA GTTCCGGGCC
CAGACCACTG TCACGCTCCT CGACCTGACC GGCGAGGGCT GGCGCGGGTT CCTCGTCCCG
GGCGAGGCGA CGGAAGTCCC GCCGGCCGTG GAGCGGGGCC GCGACGACTT CGCATACATC
ATCTTTACCA GCGGTACCAC CGGGAAGCCC AAGGGCGTGC CGGCAACCCA CGCCAACGTC
GACTCGTTCC TCACCGAGGT AATCACGCGA TATCGGTTCC GGCCCGGGTC GAGGGTCTCG
CAGACCTTCG AGTTTTGCTT CGACGGCTCA ATCCTTGCGA TGTTCGGCGC GTGGGGCACC
GGGGCCACTT TGTGCGTCGC CCAGCGCGGT GACGTGCTGA CGCCGGTGCG CTTCATCAAC
ACGAAGCGGC TCACGCACTG GCTATCTGTA CCGTCGCTCA TCTCGTTTGC CAAGCGGCTG
CGCGCCCTGG CCCCGGATAG CATGCCGACT CTGCGGCTGA GTTCCTTCGG TGGGGAGCCA
CTCACCATAA AGCAGGTCAA CGATTGGACG GCCGCCGCGC CGAACACCGC GGTAATCAAC
TGCTACGGTC CAACCGAGAC CACGGTCATC GTCACCGCGT ACGAGGTGCC CGCCGACCCA
TCCGCCCGGA TCGAGTCGTC GAACCGCTCG GTGCCGATCG GGGACATCTA CCCGCACCTC
GACTATGTGC TGCTCGACGA GGAACTGCGC CCGTGTGACG ACGGCGAGTT GTGTGTCCGG
GGCAAGCAGC GCTTCCCCGG CTACCTCGAT CCGACGGAGA ATGCGGGACG ATTCGTCTCC
TTTGACGGCA ACCGGGGCCG CCTCTACGAC GGCACGGGGC CGTTGACCGC CCAGCACTGG
TACCGCACGG GCGACCGGAT CCGCCGCGAG TTCGGCGAGC TCATCCATCA GGGTCGAATC
GACCACCAGG TAAAGGTCCG TGGCAACCGT GTTGAGCTCG CCGAAATCGA GGCCGCGATG
CGCGCCCACG CGGACGTGGC GGAGGCTGTG GTGCTTACTG TCGCCGGCGC TGATGGGGAG
CTGGACCTGC ACGCCGTCTA CACGGGCGCG GCTTTGTCCG ACGATGACCT CACCCGGCTT
GTAGGGCATC TACCGTCGTA TATGCGGCCC CGAGTGTTCC ACCATCGGGC GGAGATCCCG
TTGACCGAGG TGGACAAGGT CGACCGCAAG CGGTTGACCT CCGAGCTGCT CGCGACCCGT
GGTTAA
 
Protein sequence
MQTRTLYDWF RTSARLHPDN VAIEVTSDAL TYAELRAATQ RLSADMRRML GRSPRRVGLL 
TSRSLVGYIA YLAALRLGAT VVPLNPANPA ARNLAIADEA TLDLVVVDDS SGDGLAEFRA
QTTVTLLDLT GEGWRGFLVP GEATEVPPAV ERGRDDFAYI IFTSGTTGKP KGVPATHANV
DSFLTEVITR YRFRPGSRVS QTFEFCFDGS ILAMFGAWGT GATLCVAQRG DVLTPVRFIN
TKRLTHWLSV PSLISFAKRL RALAPDSMPT LRLSSFGGEP LTIKQVNDWT AAAPNTAVIN
CYGPTETTVI VTAYEVPADP SARIESSNRS VPIGDIYPHL DYVLLDEELR PCDDGELCVR
GKQRFPGYLD PTENAGRFVS FDGNRGRLYD GTGPLTAQHW YRTGDRIRRE FGELIHQGRI
DHQVKVRGNR VELAEIEAAM RAHADVAEAV VLTVAGADGE LDLHAVYTGA ALSDDDLTRL
VGHLPSYMRP RVFHHRAEIP LTEVDKVDRK RLTSELLATR G