| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0680 |
|---|
| Symbol | |
|---|
| ID | 5057121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 765248 |
|---|
| End bp | 766747 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640472947 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001157535 |
|---|
| Protein GI | 145593238 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC TGCTGCACGA CCTGCTGGAC CGCACTGCGA CCGCTCAGCC GGACACGTCG
GCGATCAGCC ACGGCGACCA GGTCCAAAGC TACCGGAACC TGAACGCAGC CAGCCGGCGG
CTTGCCAGCT GGCTGGCTGC GCGCGGTGTC CGCCAGGGCG GACGAGTGCT CATCTGCCTG
CCCACCGACC CGCTGGTACC CGCTCTGCTG TACGCCTGCT CCCGGGCGGG CGCCGTGTTC
AGCATGGTCA ACGAGCAATC CCCCACGGTC GCCTTGGCCC ATGTGCTGAC CGACGCCGAG
CCGATACTGC TCGTCACTGA CAGTCCTCGA GCACTCGCTG TGGCCGTAAG CAACGGCGTG
CCGACCGTGG GTACGGCCGA GCTGCGCGAC GTCGTACAGG ATGGTCCGGA CTCCGAGCCG
GCAGAGTCCC CACTGGCCGT CGACCCGATA TGCCTGATCT ACACCTCTGG CAGCACCGGC
ATGCCGAAGG CAGTGGTCTC CACCCACGCG CAGGTGGTCT TCGCGGTCAA GGCCATCGCC
TCCCAACTCG CCTACCGGGT GGACGACGTC GTGTGGTGCG CGCTGCCACT GTCGTTCGAC
TACGGTATGT ACCAAATCTT CCTCAGCACC CTGGCCGGCG CCCGGCTACA TCTGGCCTCC
CCCGCCGACA CCGGCCCGAC GCTGCCCCGG CATCTGGTCA GCAGCGCCGC GACCGTGCTG
CCCGCCGTGC CCGCGCTGGC CCGTGGCCTA GCCCGAATGC TGTCCCGCCC GGGTGCGACC
GTGCCCGCGC TGCGTCTCCT CACCAACACT GGCGCCGCGA TGCCGCCGGA GGTTCTGCGC
GACCTACGTG CCCGCATACC CACCTTGCGC GTCCAGCTGA TGTTCGGGCT GACTGAGTGC
AAACGGGCGG CGATCATGCC AGTGGATGAG GACCTGCGCC GACCGGACGC CTGCGGGCGA
GCCCTGCCCG GCACCGAGAT CCTGGTCGTC GACGCGGACG GCGCGACGGT GCCGCCCGAC
ACCGTCGGCG AGATCGTGGT CCGAGGCCCG CACGTCATGG CCGGCTACTG GCGTCGAGCG
GAACTCACCG CCCAGCGTTT CCCCCGTGTT GAAGGCCTCT TCCCCCAGCT GCGCACGGGC
GACCACGGCT GGCTCGACGC CGAGGGATAC CTGTATTTCG TCGGCAGACG CGACGACATC
TACAAGGAAC GCGGCATCCG CGTCAGCGTC ACCGAGGTCG AGGCGGCGGC GTACCGAATA
CCGCAGATTC AGGCAGCCGC GGTGCTGCCA CCGCGAGTGG AGGACGGCCG TGACTCGGCC
ACTTTGTTCG TAGTGAGCGA ACTGACAGCG CCCGAGGTAC TCGCCGCGCT GCGCACCGAG
CTCGACGAGC TCAAGACACC CCGGACGTGC CTGGTCGTAC CGGACATCCC GATGACCCGT
AACGGCAAGG TCGACCGAGC CGAGCTGTAC CGAATGTGGT CGGAGCACGC TTGTGTCTGA
|
|---|
| Protein sequence | MTALLHDLLD RTATAQPDTS AISHGDQVQS YRNLNAASRR LASWLAARGV RQGGRVLICL
PTDPLVPALL YACSRAGAVF SMVNEQSPTV ALAHVLTDAE PILLVTDSPR ALAVAVSNGV
PTVGTAELRD VVQDGPDSEP AESPLAVDPI CLIYTSGSTG MPKAVVSTHA QVVFAVKAIA
SQLAYRVDDV VWCALPLSFD YGMYQIFLST LAGARLHLAS PADTGPTLPR HLVSSAATVL
PAVPALARGL ARMLSRPGAT VPALRLLTNT GAAMPPEVLR DLRARIPTLR VQLMFGLTEC
KRAAIMPVDE DLRRPDACGR ALPGTEILVV DADGATVPPD TVGEIVVRGP HVMAGYWRRA
ELTAQRFPRV EGLFPQLRTG DHGWLDAEGY LYFVGRRDDI YKERGIRVSV TEVEAAAYRI
PQIQAAAVLP PRVEDGRDSA TLFVVSELTA PEVLAALRTE LDELKTPRTC LVVPDIPMTR
NGKVDRAELY RMWSEHACV
|
|---|
| |