| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0678 |
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| Symbol | |
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| ID | 5057119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 762677 |
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| End bp | 764017 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640472945 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001157533 |
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| Protein GI | 145593236 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0544758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAGA CACCTCGAGC CTGGCGCAGC GTCCTGCCGC ACCTTGGCTA CGAGCTGCCC
GCCGATGTGA CGCCGCAGCG CACCGGTGGC CCGATGATCG CCACTTTGCC GCTAGAGCTG
ATCCGGCAGA GTGTCGCAAC CCGGGAGTTC TGGCCGATCC CCGAGCCGGT CGCCGAGCGA
TACCGAAGCT ACCGGCCGGC GCCGCTGTGG CGGGCCCGGC GCTTCGAGGC CGAGATCGGA
GCGACCGTCC CGATCTATGT GAAGTACGAG GGTGGCAACA TCTCGGGTAG CCACAAATTC
AACACTGCGC TGGCGCAGGC CCACTACTAC CACCGCGCAG GCTTCCGGGA GCTGGTCACT
GGAACCGGTG CCGGGCAGTG GGGCAGCGCG CTCGCCGCCG CGTGCGCCGC ATTCGGCATA
GCCTGCACCG TTTTCATGGT CGGCGGGAGC CTACGCGATA AGCCGTATCG GGGCAGCCTG
ATGCGCCTCT ACAACGCGGA ACTGCACGCC AGCCCCAGCC GACTGACACA CGTGGGACGC
GTTGCCGCCG AGCGGTCGGG GCAGGGCAAC AGCCTCGCGT TAGCCATCGG CGAGGCCGTC
GAGTATGCGA GAGCGGACCC CAAGCGGGCG TTTTGTATCG GCAGTGGCGA GACATACAGC
ATCCTGCACC AGTCGGTGAT CGGCCTGGAA GCCATCGACC AGCTTGCTGC TCTTGACGCC
AGCGTGGAGG CGGTGATCGG TTGCGTGGGT GCCGGCAGCA ACTTCGGCGG GCTGGCCCTG
CCGTTCTTCG CCGCCGACTC CGCCGGGGAG CGGGACGTGC CCACCGAATT GATCGCGGTG
GAGTCCAGCA CCACCCCGAA ACTCACCCGT GGGGTGTACG CCTTTGACCA CACGGACTCC
ACCGGCACCG GACCGATGGA GGCGATGTAC ACGATCGGCA GCGGGTACGC GATCCCCGCA
TCGCACTCGG CGGGATTGCG CTTCCACGGT GCGGCGAAGC TCATCTCTGC GATGCGGTAC
CGAGACCAGA TCTCGGCGTT GGCGGTGGGC CAGCGGGAGG CGCTGACCGC TGGCCGTACG
TTCGCCCTGA CCGAGCTGGT AGTGCCGGCA CCGGAGTCGG GTCACGCGCT GGCGGCCGCT
GCCCGGGTAG CGACGGGCCG CGAACCCGGG CACCCAGCGC GGCGCGGGCT GCTGGTCTGT
ATCAGCGGGC ACGGCCTGCT CGACCTGGCC GCATACGACA AGCTCCTCGC CGGTTTGCCC
GAGGACCGCG CAGCCGACTC GGACGCGTTG CGGGCGGCGA CGGCGTCGCT GCGCGCAGTC
CACCCGATGG GAGGAGCGTG A
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| Protein sequence | MTETPRAWRS VLPHLGYELP ADVTPQRTGG PMIATLPLEL IRQSVATREF WPIPEPVAER
YRSYRPAPLW RARRFEAEIG ATVPIYVKYE GGNISGSHKF NTALAQAHYY HRAGFRELVT
GTGAGQWGSA LAAACAAFGI ACTVFMVGGS LRDKPYRGSL MRLYNAELHA SPSRLTHVGR
VAAERSGQGN SLALAIGEAV EYARADPKRA FCIGSGETYS ILHQSVIGLE AIDQLAALDA
SVEAVIGCVG AGSNFGGLAL PFFAADSAGE RDVPTELIAV ESSTTPKLTR GVYAFDHTDS
TGTGPMEAMY TIGSGYAIPA SHSAGLRFHG AAKLISAMRY RDQISALAVG QREALTAGRT
FALTELVVPA PESGHALAAA ARVATGREPG HPARRGLLVC ISGHGLLDLA AYDKLLAGLP
EDRAADSDAL RAATASLRAV HPMGGA
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