Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0651 |
Symbol | |
ID | 5057092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 732618 |
End bp | 733301 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640472918 |
Product | hypothetical protein |
Protein accession | YP_001157506 |
Protein GI | 145593209 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCATC AGATAACTCG GCGCACAGTC CTCAGAACCG CAGGCCTTAC GAGCGCGGCG GTCGCCGTCA GTTCGGTTCT ACCTGACACC TCCGCGTCAG CCGCTGAGCG CCGCAGGCCG AAGCGCCCGG CGACTTCGAC GAACGGATGG ACGATCCAGG CAAACGTGGA CCGCGATTCA CAGGTGTGGA CGCGGTCGGT GGCCGGTACT GGGCTAAGCG TGCCGGTTTG GATCGGCGAC GTCGAGGTGA TCCTGCTGCA TGCGGTGAGA CGGTTCCACT ACGAAATCGA AGAGATTCAG CGGACTGACC TGACCGGCTG GTGTGACATC AGCAAGCTCC GTAAGAGCGC GCCTGAGTCC AACCTCGCTT CCGGCACGGC AGTCCGCATT CGGCCGGGTG CGCGCGCCAA AGGAGGCTTC TTCCCGCTTC AAGAACTGGT GCTGCGGGAC ATCCTCGCCG ACTGCGAGGG TGCCGTGCGC TGGGGTGGCG ACGATCGTGA GGTGGATGAA TCGCTGTTCT ACATCGCATT CGGCCCGCAC GATAGACGGG TTCGGCAGGC CGCCGTCAAG CTCCGCGGGT GGGAGGTCAA ACCCGGGGAG GGCGCCGGGG TACGATTCGA CTTTCTGTCC CCGTCCCGGC TTAGTCGGGC CGACAACCTG GCGCGCGCAC AGCATTCGGG CTGA
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Protein sequence | MDHQITRRTV LRTAGLTSAA VAVSSVLPDT SASAAERRRP KRPATSTNGW TIQANVDRDS QVWTRSVAGT GLSVPVWIGD VEVILLHAVR RFHYEIEEIQ RTDLTGWCDI SKLRKSAPES NLASGTAVRI RPGARAKGGF FPLQELVLRD ILADCEGAVR WGGDDREVDE SLFYIAFGPH DRRVRQAAVK LRGWEVKPGE GAGVRFDFLS PSRLSRADNL ARAQHSG
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