| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0639 |
|---|
| Symbol | |
|---|
| ID | 5057080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 721801 |
|---|
| End bp | 723000 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640472908 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157496 |
|---|
| Protein GI | 145593199 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1690] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.826954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTACG CCGTGCTGCC CCACACCCGG GCTCCGGTTC GGGTGTGGAC CGACCCACAC
ACCATTGAAC CGCAGGCCGC TCGTCAGCTT CGCAACATCG GTACGCTGCC CTGGGTGCAG
GGCGTCGCCG TGATGCCCGA CGTGCATTTT GGTAAGGGCG CCACCGTCGG CTCGGTCATC
GCGATGCGGC AGGCTGTCTC GCCGGCCGCG GTCGGGGTTG ACATCGGCTG TGGCATGTCG
GCGGTGCGCA CCTCGCTGAC CGCGGCCGAC CTGCCCGACG ATCTCGCGGG GCTGCGGCGT
GCCATCGAGG ACGCGATCCC GGTCGGCTTC GCCCAGCGCG ACAAGGCGGT GAACCCGCGT
CGGGTTCGGG GCTTGGAGCA GGCGGGTTGG GACGCCTTCT GGCAGCGCTT CACCGGTCTG
CACGAGGGAG TGACCCGGCT GGAGCGCCGA GCGATGAACC AGATGGGGAC CCTCGGCGGG
GGGAACCACT TCATCGAGGT CTGCCTCGAG CAGGGTGGTG TCGATGCGGG TCGGGTGTGG
TTGATGCTGC ACTCCGGGTC CCGGAACATC GGCAAGGAGT TGGCGGAGCG GCACATGGCC
GTCGCCCGGA GGCTGCCGCA CAACGCCGCG CTGCCCGATC GTGACCTGGC GGTCTTCCTC
GCGGGGACGG CGGAGATGGA CGCCTACCGC CGGGACCTGT GGTGGGCGCA GGAGTACGCG
CGGCGTAACC GCGCGGTCAT GCTCGCACTG CTCTGCACCG TGGTCCGGGA CCGGTTCCCG
CAGGTGCGCT ACGACGAGCC GATCAGCTGC CACCACAACT ACGTCGCTGA GGAGACCTAC
GACGGCGTGG AGGTGTTGGT AACCCGCAAG GGCGCTATCC GGGCCGGCGC GGGGGAGCTG
GGCATCATCC CCGGATCGAT GGGGACCGGG TCCTACATCG TGCGGGGCAG GGGAAATGAG
TCCGCGTACT GCTCCGCGTC GCACGGTGCG GGCCGGCGGA TGTCCCGTGG GCAGGCCAAG
CGGAGTTTCA CCACCGATGA CCTGGCCGCG CAGACCACCG GGGTGGAGTG CCGCAAGGAC
GCCGGGGTCG TGGACGAGAT TCCTGGTGCG TACAAGGACA TCAACGCCGT GATGGCGCAG
CAGACCGACC TGGTTGAGGT GGTAGCGCAC CTCAAGCAGG TGGTGTGCGT GAAGGGGTAG
|
|---|
| Protein sequence | MTYAVLPHTR APVRVWTDPH TIEPQAARQL RNIGTLPWVQ GVAVMPDVHF GKGATVGSVI
AMRQAVSPAA VGVDIGCGMS AVRTSLTAAD LPDDLAGLRR AIEDAIPVGF AQRDKAVNPR
RVRGLEQAGW DAFWQRFTGL HEGVTRLERR AMNQMGTLGG GNHFIEVCLE QGGVDAGRVW
LMLHSGSRNI GKELAERHMA VARRLPHNAA LPDRDLAVFL AGTAEMDAYR RDLWWAQEYA
RRNRAVMLAL LCTVVRDRFP QVRYDEPISC HHNYVAEETY DGVEVLVTRK GAIRAGAGEL
GIIPGSMGTG SYIVRGRGNE SAYCSASHGA GRRMSRGQAK RSFTTDDLAA QTTGVECRKD
AGVVDEIPGA YKDINAVMAQ QTDLVEVVAH LKQVVCVKG
|
|---|
| |