Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0624 |
Symbol | |
ID | 5057065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 705435 |
End bp | 706157 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640472893 |
Product | two component transcriptional regulator |
Protein accession | YP_001157481 |
Protein GI | 145593184 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGAGCA GGGCCGCGAG GGACCAGGAC ACGAATGGAC GAGTGCTGGT CGTCGACGAC GAACAGAGCC TCGCCAAGGT CGTCGCGAGC TACCTCGAAC GCGACGGCTA CCAGGTGCGC TGCGTCTTTG ACGGCCCGGC GGCGCTGGAC GCCGCGCGGG AGGACGAGCC CGACGTCGTT GTCCTTGACC TGATGTTGCC CGGCCTCGAC GGTGTGGAGG TGTGCCGGCG GTTGCGGGCG TTCAGCGATT GCTACGTCAT CATGCTGACC GCCCGCACGG AGGAGACCGA CAAGCTGACC GGGCTCGGTG TCGGGGCCGA CGACTACCTC ACCAAGCCGT TCAGCCCTCG AGAACTCGTC GCCCGCGTCG CGGCGATGCG GCGTCGCCCA CGCCAGCCGC GCATCAGGCC AGAGCCGGCA CTGCGCCGGT TCGGTCCACT GGAGGTGGAC GTGCCGGCCC GCGAGGCCCG CCTCGACGAG GTGCCCGTGC CGCTCACCCG CACCGAGTTC GATCTGCTGG CGGTTCTGTC CGGCCGGCCG AACGTCGCGC TGAGCCGCGC CCAGCTGATC ACCGCGGTGT GGGGGGACGG GTGGGTGGGC GACGAGCGCC TGGTCGACGT ACACATCGGA CACCTGCGCC GCAAGCTCGG CGACGGCCCC GCCCGTCCCC GGTTCATCCT CACCGTACGG GGCATCGGCT ACCGGATGAG ACCGCAGTCG TGA
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Protein sequence | MRSRAARDQD TNGRVLVVDD EQSLAKVVAS YLERDGYQVR CVFDGPAALD AAREDEPDVV VLDLMLPGLD GVEVCRRLRA FSDCYVIMLT ARTEETDKLT GLGVGADDYL TKPFSPRELV ARVAAMRRRP RQPRIRPEPA LRRFGPLEVD VPAREARLDE VPVPLTRTEF DLLAVLSGRP NVALSRAQLI TAVWGDGWVG DERLVDVHIG HLRRKLGDGP ARPRFILTVR GIGYRMRPQS
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