Gene Strop_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0624 
Symbol 
ID5057065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp705435 
End bp706157 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content71% 
IMG OID640472893 
Producttwo component transcriptional regulator 
Protein accessionYP_001157481 
Protein GI145593184 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGAGCA GGGCCGCGAG GGACCAGGAC ACGAATGGAC GAGTGCTGGT CGTCGACGAC 
GAACAGAGCC TCGCCAAGGT CGTCGCGAGC TACCTCGAAC GCGACGGCTA CCAGGTGCGC
TGCGTCTTTG ACGGCCCGGC GGCGCTGGAC GCCGCGCGGG AGGACGAGCC CGACGTCGTT
GTCCTTGACC TGATGTTGCC CGGCCTCGAC GGTGTGGAGG TGTGCCGGCG GTTGCGGGCG
TTCAGCGATT GCTACGTCAT CATGCTGACC GCCCGCACGG AGGAGACCGA CAAGCTGACC
GGGCTCGGTG TCGGGGCCGA CGACTACCTC ACCAAGCCGT TCAGCCCTCG AGAACTCGTC
GCCCGCGTCG CGGCGATGCG GCGTCGCCCA CGCCAGCCGC GCATCAGGCC AGAGCCGGCA
CTGCGCCGGT TCGGTCCACT GGAGGTGGAC GTGCCGGCCC GCGAGGCCCG CCTCGACGAG
GTGCCCGTGC CGCTCACCCG CACCGAGTTC GATCTGCTGG CGGTTCTGTC CGGCCGGCCG
AACGTCGCGC TGAGCCGCGC CCAGCTGATC ACCGCGGTGT GGGGGGACGG GTGGGTGGGC
GACGAGCGCC TGGTCGACGT ACACATCGGA CACCTGCGCC GCAAGCTCGG CGACGGCCCC
GCCCGTCCCC GGTTCATCCT CACCGTACGG GGCATCGGCT ACCGGATGAG ACCGCAGTCG
TGA
 
Protein sequence
MRSRAARDQD TNGRVLVVDD EQSLAKVVAS YLERDGYQVR CVFDGPAALD AAREDEPDVV 
VLDLMLPGLD GVEVCRRLRA FSDCYVIMLT ARTEETDKLT GLGVGADDYL TKPFSPRELV
ARVAAMRRRP RQPRIRPEPA LRRFGPLEVD VPAREARLDE VPVPLTRTEF DLLAVLSGRP
NVALSRAQLI TAVWGDGWVG DERLVDVHIG HLRRKLGDGP ARPRFILTVR GIGYRMRPQS