Gene Strop_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0623 
Symbol 
ID5057064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp704329 
End bp705438 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content72% 
IMG OID640472892 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001157480 
Protein GI145593183 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.779976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTCC GGCGCGTCAA CCTCGCGGTG CGGCTCTTCG CCGCGCAGGT GCTCGTGCTC 
GCCGTGGGCG GACTGACCCT GGGGCTGGTC GCCGTCGCAG TGGGACCCCG GATCTTCCAT
GCGCACCTGG GGCGGGTCGG CGGGGAGGTC GGTGCCGAGG CGCGCTGGCA CGTCGAGCAG
GCGTACGCCT CGGCGAACGC GCTCGCGCTC GGTGTCGGTC TGCTCGCCTC GCTGATTGCG
GCGCTGGCGG CCAGTGCGTA CGCGACACGG CGGATCGCCC GCCCGGTCAC TCACTTCGCG
TACGCGTCGG CCAGCCTCAC CGACGGGCAC TACGACGTCC GCATGGCCGA CCCTGGCCTC
GGCAACGAGC TCAAGATCCT CGCGGACTCC TTCAACACCA TGGCGGAACG CCTGGAGACC
GTCGAAGCGA CCCGGCGACG GCTCCTCGCC GACCTCGGCC ACGAACTGCG CACCCCGCTC
GCCACCATCG AGGCGTACCT CGAAGCGGCT GAGGACGGCG TCGCCGTCGA CGACGAAGAC
CTCCAGTCGG TGCTGCGTGC CCAGACCGAT CGGCTGCACC GCCTCGCCGA CGACATCGCC
GCGGTCTCCC GCGCCGAGAC ACATCAGCTC GACCTGCACC CGGTACGGAC GGCCCCGGGG
GACCTGGTCC GGGATGCCGT GGCCGCGGCT TGGCCCCGCT ACGCCGGCAA GGGCGTGACG
CTGCGGAGCG ACCTTCGCCC GTCCCCGCAG GTCGACGTCG ACCCACAGCG GATGGGGCAG
GTACTCGGCA ACCTGCTGGA CAACGCGCTA CGGCACACGC CCGAGGGCGG GACGGTCACG
GTACACGTGA TCGGCGGTGC CAGAAGTGTG GAGCTGGCGG TGGCCGACAC CGGTCCCGGC
ATCCCGGCGC AGCACCTCCC GCACATCTTC GAACGCTTCT ACCGGGTCGA CACCGCTCGG
GACCGGGGCA ACGGCGGGTC GGGAATCGGG CTCGCCATCG TGCGAGCCGT GGTCAGCGCC
CACGGGGGAC GGGTACGGGC CGAGAACGTC CCGGGCGGTG GCGCGATGGT CAAGGTGGTC
CTGCCACCGG CGGGACAGGC GCAGGTCTGA
 
Protein sequence
MNLRRVNLAV RLFAAQVLVL AVGGLTLGLV AVAVGPRIFH AHLGRVGGEV GAEARWHVEQ 
AYASANALAL GVGLLASLIA ALAASAYATR RIARPVTHFA YASASLTDGH YDVRMADPGL
GNELKILADS FNTMAERLET VEATRRRLLA DLGHELRTPL ATIEAYLEAA EDGVAVDDED
LQSVLRAQTD RLHRLADDIA AVSRAETHQL DLHPVRTAPG DLVRDAVAAA WPRYAGKGVT
LRSDLRPSPQ VDVDPQRMGQ VLGNLLDNAL RHTPEGGTVT VHVIGGARSV ELAVADTGPG
IPAQHLPHIF ERFYRVDTAR DRGNGGSGIG LAIVRAVVSA HGGRVRAENV PGGGAMVKVV
LPPAGQAQV