| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0612 |
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| Symbol | |
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| ID | 5057053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 692079 |
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| End bp | 693851 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640472882 |
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| Product | periplasmic component of the Tol biopolymer transport system-like protein |
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| Protein accession | YP_001157470 |
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| Protein GI | 145593173 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGTT CCGCGGGTAT GCTTTCGCAA CCGGGACGGG TGCGTGGCCC GACGTTCCAG
TTGCACAGGC TCGCCGAAGA CCCGGCCGGG GCAGGCGACG GGGCGATCTC GCCGGACGGC
ACGCGCTTTG TCGCCTCGTC GCGGCGCACG GGATCGCTCA ACCTCTGGTT CTACGAGATC
GCCACCGAGC AGTGGCACCA GGGCACACGC GGCGCGGGCG ACGACATCGA GGCCCAGTGG
TCACCCGACT CCGCCTGCCT CGCGTTTACC TCCTCGCGCT GCGGGCACAA GGCGGTCTGG
CTGTATCGGT TACACGAAGC GCGGATCAGC AGGCTCACAT TCGGCCCATA CGACGAGGAG
TATCCGAACT GGTCGCCGGA CGGCTCTAAG ATCACCTTCG TTGGGGGTGG CTGGGCACAG
CGGCAGGTTT ACCTGGTGTC CGCCACCGGC GGGCCACCCA TGCCGGTGAC CGACGAGCCC
GGACGGACGG GTGCGTGCAC CTACCTGCCC GACGGCAGCG GCCTCATCTG CCACTCCTAC
GACACTGGCG CCAGCGCGGT GTCGATCCTG CCGCTAGACG GCAGTATGCC ACGACAGGTA
ACCGACGGCA GCACGTGGGA CTACAAACCG ACCGTCTCGA GTGCGCACCC GGTAGTGGCG
TTCTCCCGAA GCCTCGAGGG ACGCTCAGTG ATCTGGGTGC AGCAGCTTGC CGAGCCGTAC
CGCGGGCGCG CGCTGGTCGT GGAAGCAGGC GACGACCGGT GGCCGAACTG GACCGCGGAC
GGCCAGCACC TCTTCTTCCA TCGGCTCGTC GACCGCGGGG TCGGCATCTG GGTGCTCGAC
CGCCGCACCG ACACGGTCAC CCAAGTCGTT GGGCCAGACG AACAGCCAAG GTACGGCAAT
ATCTCCCCCG ACGGCACCCG GCTGATCTAC GCCGCGGAGG AAAGCGGCCG GTCCGTGGTG
AAGGTTCGCG AGATCAGCGG CGGGTTGACC AAGGTGCTCC CGCTCGGAGA CGCGGCGTTT
CCGCAGTGGT CTCCGAACGG TCGTACTGTC GCCTATCTCA CGCGGGATGT GAGCAGACCG
CGGTGGGAGA TCGCGACCTA TGACCTCGCC ACGGCCACGA GCACCGTGTG GACCTGCGGC
GTCACATGGC CCAAGAGCCT GCATGGGCCG CTGGACTGGT CACCGGACAG CACCCGGCTC
GTCTTCAGCA CAGACACTGA ACCGTTCGAG GCGGATCTGT GCGTCCTGGA CCTCCGGGAC
GGCAGCGTCA CCAAGCTCAC CGAGGACCCC TGGTGGGACG AGGCACCGTC ATGGACACCG
GACGGCACGG GTGTCGTTTT CCTCTCGACC CGCGGCGGTG ACTGGACCTG GGGCTTCTAC
CGCATGGACC TGAGTACCGG TGAGATCCAT GCTCTTGCCC GCCCGGACTA CATCGAGAAG
AACAACCCCC GCATGCTGCC CGACGGCACG CTCATCTACT CCCTTGCCGT TTCCGGCATT
GAGGATCTGT TCGAGCAGCT GCCCGACGGA CGTGGGCGCG TGCTCTCGTC GGTCGGGCCC
GCTGTCCGCT ACCCGGTACC CAGTCGGGAT GGCTCGATGC TCGCGTTCAC CCGCACACAC
CGCACCGTCG AGTACTGGCT GGCAAAAAAC GTGTGGGGTG CGGGCTCCCC CATCGCGGAC
CTGGCCGACG GTGATGCGCG GCGACGCGGC ACCCATGGCC CACAGACCCG CACCGGACCG
GTGCGCAGTC CGGTTAACAC GCGCCGCAGA TGA
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| Protein sequence | MNGSAGMLSQ PGRVRGPTFQ LHRLAEDPAG AGDGAISPDG TRFVASSRRT GSLNLWFYEI
ATEQWHQGTR GAGDDIEAQW SPDSACLAFT SSRCGHKAVW LYRLHEARIS RLTFGPYDEE
YPNWSPDGSK ITFVGGGWAQ RQVYLVSATG GPPMPVTDEP GRTGACTYLP DGSGLICHSY
DTGASAVSIL PLDGSMPRQV TDGSTWDYKP TVSSAHPVVA FSRSLEGRSV IWVQQLAEPY
RGRALVVEAG DDRWPNWTAD GQHLFFHRLV DRGVGIWVLD RRTDTVTQVV GPDEQPRYGN
ISPDGTRLIY AAEESGRSVV KVREISGGLT KVLPLGDAAF PQWSPNGRTV AYLTRDVSRP
RWEIATYDLA TATSTVWTCG VTWPKSLHGP LDWSPDSTRL VFSTDTEPFE ADLCVLDLRD
GSVTKLTEDP WWDEAPSWTP DGTGVVFLST RGGDWTWGFY RMDLSTGEIH ALARPDYIEK
NNPRMLPDGT LIYSLAVSGI EDLFEQLPDG RGRVLSSVGP AVRYPVPSRD GSMLAFTRTH
RTVEYWLAKN VWGAGSPIAD LADGDARRRG THGPQTRTGP VRSPVNTRRR
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