| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0584 |
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| Symbol | |
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| ID | 5057025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 656839 |
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| End bp | 658134 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640472854 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_001157442 |
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| Protein GI | 145593145 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGCG ACCCGCGCCG GCAGATCCCC CGTACCGACA CTCTGCTCAC AGATCCACGT
CTGTCCGAGG CGCACCGAAT GCTCGGCGCC GAGGTTGTGA AGCAGGCGGT CCGGGAGGCC
CAGCAGCGGG CCCGGGACGG CCGGATCAAG CCCGTCGACG TGTTGCCCGC CGCGCTTGCC
GCACTGCCGC CGGCCCCCGC GCTGCTGCGC CGGGTCATCA ACGCGACCGG CGTGGTGCTG
CACACCAACC TCGGCCGTGC GCCGCTGTCG GCGGCGGCCG TCGAGGCGGT CACCGCGGCC
GCCGGATATG TCGATATCGA GTACGACGTG ACCACCGGCG CCCGGGCCCG CCGTGGCCGT
AGCGCTCTTG ATGCCCTACG GGCCGCGGTG CCCGACGCCG GCGACGTGCA TGTGGTGAAC
AACGGGGCGG CCGCGATCGT GCTGGCCGCC ACCGCGCTCG CAGCGCGCCG GGAGATCGTC
GTTGCCCGGT CCGAGATGGT GGAGATCGGT GACGGCTTCC GACTACACGA GCTGCTGGCC
AGTACCGGCG CCGGGTTGTG CGAGGTCGGC GCCACCAACC GGGCGCACCT GCGCGACTAC
GCCGAAGCCG TCGGCCCGCG GACCGGTTTC ATCCTCAAGG TTCACCCTTC CAACTTCCGG
ATCGAGGGTT ACACGTCGGC GGTTGGCGTA GCCGATTTGG CCAGGCTGCC GGTTCCGGTG
GTCGCCGACA TCGGGTCAGG GCTGCTGCGC CCGGAGCCGC TGCTGCCCGA CGAGCCGGAC
GCCGCCACCT GGCTGCGTGA GGGCGCGACG GTGGTGACCG CGAGCGGTGA CAAATTGCTC
GGTGGCCCGC AGGCTGGGCT CCTGCTCGGC ACCCGCGAGG TGATTGAGAC GCTGCGCGGC
CACCCTCTCG CCCGGGCGTT GCGCGTCGAC AAGCTCACCC TCGCCGCGCT GGAGGCGACC
CTTCGCCGGC CCGTCACCCC CACCGCCTCA GCCCTACACG CCGACGAGGG GGAACTGCGG
GAACGCGTGG AGAGGCTGGC AGCCCGGCTG GTCGCGAGCG GCATTGCCGC GACGGTGACG
CCCAGCGCCG GGGTCGTCGG GGGCGGCTCG GCGCCGGGCC TGCGGTTGCC CGGCTGGGCC
GTTCGACTCC CACCAGGGCT TGCCGAGCCG CTGCGCCACG GCGTCCCGTG CGTGGTTGGC
CGGGTCCACG ATGGTCACTT GCTGCTGGAC CTGCGTTGCG TCCCGCCAGC CGAAGACGGC
ACCGTGGCGC AGGCGGTGGA ACGCGCATGT TCGTGA
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| Protein sequence | MTGDPRRQIP RTDTLLTDPR LSEAHRMLGA EVVKQAVREA QQRARDGRIK PVDVLPAALA
ALPPAPALLR RVINATGVVL HTNLGRAPLS AAAVEAVTAA AGYVDIEYDV TTGARARRGR
SALDALRAAV PDAGDVHVVN NGAAAIVLAA TALAARREIV VARSEMVEIG DGFRLHELLA
STGAGLCEVG ATNRAHLRDY AEAVGPRTGF ILKVHPSNFR IEGYTSAVGV ADLARLPVPV
VADIGSGLLR PEPLLPDEPD AATWLREGAT VVTASGDKLL GGPQAGLLLG TREVIETLRG
HPLARALRVD KLTLAALEAT LRRPVTPTAS ALHADEGELR ERVERLAARL VASGIAATVT
PSAGVVGGGS APGLRLPGWA VRLPPGLAEP LRHGVPCVVG RVHDGHLLLD LRCVPPAEDG
TVAQAVERAC S
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