| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0533 |
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| Symbol | |
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| ID | 5056972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 605966 |
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| End bp | 609199 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640472805 |
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| Product | Phage-related protein-like protein |
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| Protein accession | YP_001157395 |
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| Protein GI | 145593098 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5412] Phage-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.132242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC AGATCATCGG GCGCATCTTT GTCAAGGTCA CTCCGGATAC CAGCGCATTC
CGTGCTGAGG CGAAAGCGCA GCTCGAACGC GAGGAGCGGC GCCTACCTGA GCTGACCACC
AGGCTCGCCG TAGAGCTGGA CGACGGCGAG GCTGCGGAGA CCGCAGCCGA GGCCAGAGCC
GTCCGCGACA GCGCTCAGCA AGCCATGCGG GATCTGACCC TGCGCGTCAA TCTGGATGAC
CTGAGTAGCG TTCGGTCCGC CTTGGCCAGG GTAAACGCCG AGTTGGTCAA CCTGGATGCG
ATAGAACTCC CAGTGGAGCT TGACCGCGAC TCGCTAGAGT CGATGCGAGA CCTCCTGGAG
CAGCGCGTCA AGGACATCGG TATCGACATT AAGGTCAATC TCGATGACGA GGCCAGTATT
GAGCGGGCTA TTAAAAAGGT TGAGGCACAG CTAAGCGCGC TAAATGAGAT CAACCTTAAT
GTAGACCTCA ATGATGCCAG CCTGTCTGCG GCTAAAGCAG AGCTGGAGGC CCGACTCGAC
CAAGTGCGTG TCGAGACCGA TATAGACAAC GCGGCATCCG CCCGGGTGTC AGCGGCGTTG
GCCATCCTGA CTCGTACGCG CGATGCCGTT ATCCGCCCTG TAATCGATCG AAGCGCCCTA
GCCGCCGTCC GCTTTGTTGA CGTGCTGAGC GGGTTCCGCG CGTTGCGTGA GAGCATCGCA
CAAGCGCGCA CAGCATTCCT CGGACTTTTT ACCAACCTTC CCCAAATAAG CACTATGGCG
CTTGCCGTGA CGGCCCTTTC TGGCGCACTT GTTTCGGCAG CGGGAAACGC CATTGGACTA
GCTGGATCGC TAGCCCAGCT CCTTCCAATT GCCCTCGCCC TACCTGGCAT CGCGATTGGC
CTCGCGGCGA TGGCCGTCGC ATTTGCCGAC TTTGGGAACC AACTCCCTGC CGTAGCCGAG
CGCTTCGGGC AGCTCCAGGG CATCATTAGC GACGGATTTT GGGAAATCGC TCGTGGTCCA
ATCAATAACC TCTTGACAGC GGCGCTTCCC CTCCTGGAGG CGGGTCTGGG CAAGGTGTCC
GGCTCTATTG GAGGCTTCTT CGCCGCTTTT GCAGGCTCGC TCGGCGCTGA GGGCGGATTT
CTGTCGGAGC TGCCACAGAT GTTCGATCGA CTCAATGAGT CGATCAATAT CTTCACTGGC
TACACTCCGG CCCTGGCGGC CATCATGACG ATTTTCGGGC AGATCGGCTC TTCGATCCTA
CCGCCGCTAG CTGACCTCAT TGGCCGTACT GCGGATGAGT TCGCCGCTTT CCTCACCGCG
CAAACGGCCG GCGATGGCCT GACATCCATT GTTGAATCGT CCATAGAGGC GCTGTCTGGG
CTGATCGAGA CGCTCAAGGG GGCGTTTCAG GTATTTACTG CTCTGTGGCG GGCTGCGGAC
GCAGCGGGAA CCGCGACCCT GAGCAGTTTG GGCAGCGGGC TCCAGGAATT CGCTAAAACA
CTCGAAGGAC CCGAAATCCA GGGTGCCCTA ACCTCCCTTT TCTCGGCCGT CCAGGAAATG
TTCGACAGCT TCGTAAATGA GGCGGGTCCG GCATTTAGTC AAGTCTTCAT CGGTTTGGTC
TCGGTCCTGC GCGATGTGCT ACCCCTCGTC GGTTCCGCGT GGGGGCAAAT GGCGGCGGTC
CTGGGTGAAA TCTTCTCCAC TCCGGCGTTC CAGGAAGGAT TGACTTCCTT TTTCGTAGGC
GTAAATGCGG CAGTCACTGC CCTTCTGCCG GCGCTTACCC CTATTGCGGA CCTGGTTGGG
TCGCTCGGCC CAGTGTTGGG TCAGCTTGCC GCACAAATTG GCGAGGTGTT TGGCTCTCTC
ACGCCGACAT TGGACGGGCT AGTTGCAGCC CTGTTGCCGG TCATTGAAAT GCTCGGTGAC
GGCTTAGTGC AGGTAGTTAG GGCGATCAGC CCGGCGCTGT CAGAGATTGC TACGGTAGCA
TCCGCGACGC TTAGCGGACT TACGCCGCTA CTCCAGCCGA TTATTGACGC GCTCGTTCAG
ATTGTACAGG CTGTCTTGCC AGCGCTAATG CCCGTTATTA GCGCGCTCCA GCCGCTTCTT
CTGTCGATCG CAGAGCTAGC TTTGCCAGTA ATATCCACGC TACTGGCGGC GTTGGCACCC
ATTCTAGCCG ATGCCGTAGC CGCGCTTCAG CCAGTGATTG ATATCATCGT CGAGTTACTG
GATCTGCTCG TGCCATTGCT AATCCCGGCA CTCGATATGA TGACACGAGC GCTAGCGCAG
AACCTGGGCG TAGTTGTCGA GGGTGCCGCC CAAGCTATTG CCGGCCTAGT CGACGTAATA
CGCGGTGTGA TCGATTTCCT GGTCGGTGTG TTTACTGGTG ACTGGGAGCG GGCATGGAGT
GGGGTGCAGT CGATCTTTTC CGGTATCATT GATGCGGTCA TCGGCATCCT CAAAATCATC
TTCGGGCCGT TTGGAACTAT GGCCGGAATT TTCAGTGATG GACTGTCCCG CGTCTCGGAC
CTTTGGTCCT CGGTCTGGTC TTCAGTCGGC GCCGTAGCTG TCGCAGCCTG GAATGGAATC
GTTAACCACA TCCAGGATCG AATCAACTTT ATGGTAGGGA TCTTTCGGGG CATCTGGGGG
GCCGTTAGCG GCGCCATCAC ATCACTGTGG AATGAAATCC GCAGGCAGTT TGAGCGCGGC
ATCCAAACCG CCGTCGATGC GGTCGATACT GGCGTGGACG ATACTCTTTC CTTTTTCCGC
AACCTACCTG ATCAGATACG GTCCGCACTC GGCAACCTTG GCAAGCTGCT GGTTGACGCT
GGAAAGGCGC TCCTGCGCGG GCTGATTGAC GGTATCCAGT CGATGTTTGG TGAGGTCCGA
GGCAACCTCA ACAGCCTCAC TGACCTCATG CCCGATTGGA AAGGTCCGCC CAGCACCGAC
CGCACCCTGC TCTACGGCGC GGGCCGACTT ATCATCGACG GGTTTATTGA GGGATTGGAG
TCCCGGTATG ACATGGTGCG TCGCTCGCTG GGCGAGTTGA CAAAGGATGT CGCCAGCACC
GAATTCGGTG TACCTACAGC GAGCCTGGGT ATAAACTCCG ACGCCTACGG CTCAGATGTT
GGCCGGGCCA CGGATAGCAA AACGATCAAC TACCATGCCG CGCCGGGCTC AAGCATGGAC
TCGGAAGAAG ATCTGTTCGC CGCCCTTGGG CGGGCCCGTG CCTGGGGGTG GTAG
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| Protein sequence | MTDQIIGRIF VKVTPDTSAF RAEAKAQLER EERRLPELTT RLAVELDDGE AAETAAEARA
VRDSAQQAMR DLTLRVNLDD LSSVRSALAR VNAELVNLDA IELPVELDRD SLESMRDLLE
QRVKDIGIDI KVNLDDEASI ERAIKKVEAQ LSALNEINLN VDLNDASLSA AKAELEARLD
QVRVETDIDN AASARVSAAL AILTRTRDAV IRPVIDRSAL AAVRFVDVLS GFRALRESIA
QARTAFLGLF TNLPQISTMA LAVTALSGAL VSAAGNAIGL AGSLAQLLPI ALALPGIAIG
LAAMAVAFAD FGNQLPAVAE RFGQLQGIIS DGFWEIARGP INNLLTAALP LLEAGLGKVS
GSIGGFFAAF AGSLGAEGGF LSELPQMFDR LNESINIFTG YTPALAAIMT IFGQIGSSIL
PPLADLIGRT ADEFAAFLTA QTAGDGLTSI VESSIEALSG LIETLKGAFQ VFTALWRAAD
AAGTATLSSL GSGLQEFAKT LEGPEIQGAL TSLFSAVQEM FDSFVNEAGP AFSQVFIGLV
SVLRDVLPLV GSAWGQMAAV LGEIFSTPAF QEGLTSFFVG VNAAVTALLP ALTPIADLVG
SLGPVLGQLA AQIGEVFGSL TPTLDGLVAA LLPVIEMLGD GLVQVVRAIS PALSEIATVA
SATLSGLTPL LQPIIDALVQ IVQAVLPALM PVISALQPLL LSIAELALPV ISTLLAALAP
ILADAVAALQ PVIDIIVELL DLLVPLLIPA LDMMTRALAQ NLGVVVEGAA QAIAGLVDVI
RGVIDFLVGV FTGDWERAWS GVQSIFSGII DAVIGILKII FGPFGTMAGI FSDGLSRVSD
LWSSVWSSVG AVAVAAWNGI VNHIQDRINF MVGIFRGIWG AVSGAITSLW NEIRRQFERG
IQTAVDAVDT GVDDTLSFFR NLPDQIRSAL GNLGKLLVDA GKALLRGLID GIQSMFGEVR
GNLNSLTDLM PDWKGPPSTD RTLLYGAGRL IIDGFIEGLE SRYDMVRRSL GELTKDVAST
EFGVPTASLG INSDAYGSDV GRATDSKTIN YHAAPGSSMD SEEDLFAALG RARAWGW
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