Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0496 |
Symbol | |
ID | 5056935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 574702 |
End bp | 575565 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472769 |
Product | regulatory protein, IclR |
Protein accession | YP_001157359 |
Protein GI | 145593062 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCGTA GGAAACATGA GGAGGCAGGT CAACGAACCC CGGTCGACAA TGCCGAACAC TGTTGCGTTG GCCCCGAACG CTTTAGCATC CGCCCCATGC CGGGTCAGGT GCAGTCCATC GCGCGTGCCG CGGCGATCCT CCGCCTGCTG GCCAGCAGTT CCGGCCGGCT CGGCATCGGG GATATCGCCC GTTCTCTCAA CCTGCCCAAG GGCACGGCGC ACGGCATCAT ACGTACGCTG CAATACGTCG GATTCGTGGA GCAGGACAAG ACCTCCGGCA AGTACCAACT CGGCGCCGCG TTGCTGCACC TCGGCACGAG CTCCCTCGAC GTCAACGAGC TCCGTTCCCG TTCCATCAAC TGGGCGGACC CCCTCGCCGC GCGCAGCGGC GAGGCGGTCC GTGTCGGCAC TCTGCTGGAC GGCAAGGTAC TCGTGGTCCA CCACGTGTTC CGGCCCGACG ACACCCTCCA GACGCTGGAC GTCGGATCCC TGCTGCCCCC GCACGCCACC GCACTCGGCA AAGTCCTGCT CGCCTACGAC GTGGGCGCCG CCAACGCGGT CAAGCAACGC GAGCCCGAGC CCTACACCCG ACGCACCCTG GTCACTGCCC GAGCACTCAC CCGGGCCCTC AGCGAAGTCC GGGACAACGG TTGGGGAGCC GAAGTCGGAG AGATGACCCC TGGCGAGGCC GGCATCGCCG CGCCGATTCG CGGCTACGGC GGCTTGGTCG TGGGCGCGAT CGGGCTCTCT GGTCCGGTGG ACCGCACCTG CGACGGGTCC GGCAACCCCC GCCCAGCCCT CGTCACGTAC GTCCGCGACG CCGCCCGCGC GGTTTCCCGC GATCTCGGCG CCACGCGCTG GTGA
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Protein sequence | MNRRKHEEAG QRTPVDNAEH CCVGPERFSI RPMPGQVQSI ARAAAILRLL ASSSGRLGIG DIARSLNLPK GTAHGIIRTL QYVGFVEQDK TSGKYQLGAA LLHLGTSSLD VNELRSRSIN WADPLAARSG EAVRVGTLLD GKVLVVHHVF RPDDTLQTLD VGSLLPPHAT ALGKVLLAYD VGAANAVKQR EPEPYTRRTL VTARALTRAL SEVRDNGWGA EVGEMTPGEA GIAAPIRGYG GLVVGAIGLS GPVDRTCDGS GNPRPALVTY VRDAARAVSR DLGATRW
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