| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0492 |
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| Symbol | |
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| ID | 5056931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 567472 |
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| End bp | 570363 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640472765 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001157355 |
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| Protein GI | 145593058 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family
[COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGGC CGGCGGTACG CATACGGTTG CTCGGCGGGG TCGAGGTGGT GGACGGGAGC
GGCACCGCCG TCGACATCGG GGCGGGTAAG TGCCGTGCGC TGCTGGCGGC TCTGGCGATG
CAGCCCGGCA GGGCGATTCC GGACTGGCGG CTGATCGATC TGCTGTGGGG TGAGCAGCCA
CCCCGGACTG CCGTCCGGAC CCTGCAGTCG TACATCGCGC GGCTACGGGG CGGTCTGGGT
GCCGGGCGGA TTGTGCGCTC GGGTGCCTCG TACCGTCTCG ATGTGCCCGC CGATGCGGTC
GATGTGATCC GGTTCGGCCG GCGGGTCGAG GCCGGCGACG TTGCCGGGGC GCTCGCCGAG
TGGACCGGCG ATCCGCTGGC CGGGGTGCCG GTGCCGGGCC TGGCTGCGAC CGTGGACGGC
CTGGTCGAGC AGTGGCTCGG CGCGGTCGAA GCCGATCTCA CCGCCCGGGT GGACGCCGAC
GCCGCAGCGA CCGTGGGGCC GTTGACTGAG CTGAGCGCGC GGTATCCGTT CCGTGAAGGG
CTCTGGGCGC TGCTGATGAC GGCGCTGTAC CGGGTGGGCC GGCAGGCCGA CGCGCTGACT
GCGTACCGCA CTGCCCGTCA GCAGCTGGTT GAGCACCTGG GTGTGGAGCC CGGGCCGCGA
TTGCGCCGCC TGGAGTCGGC GATTCTCGAC CAGGACCCCC GTATCGGCGG CGAGCGGCGG
TCCGAGCCGG TCCACCGGCT GCCCCGGCGC GCCGTGCGAC TGATCGGCCG TGACGGTGAC
CTCGACCTCA TCGGCCGGGC GTTGGACGAG AGCCCGGTGG TCACCCTGGT CGGGCCGGGC
GGCATCGGCA AGACCGCGCT CGCCGTTGCG GCCGCCCAAC GCACCCGGCT CGAGCACGGC
GCCTGGCTGG TTGACCTGAC CGAAATCACG ACCGACCAGG ACGTACCCCA AGCGGTCGCC
GCGGCGGTGC GCGTCGAGGA AGGCCCAGGC CGGTCGCTGA GCGAGTCCAT TGTGCTGTCC
CTGAGCTCCC TGCGGGCACT ACTTGTGCTC GACAACTGTG AACACGTCGC GGACGGCGCG
GCGCGCCTGG CCCAGGCCGT CGCCGACGGC TGCCCGCAGG TGCGGGTGCT GGCCACCGCG
CGGGAACCGC TCGGCCTCAG CCACGGCCAC GAACGGCTGG TGGCCGTGAC GCCGTTACCC
GCGGCCGGGG CCGGGGCCGA TCTGTTCGCC GAACGTGCGA ACGCGCTGAC CGCCGCGTTC
ACGACGGGCG CCGCGCGGGA GGTGATCGAG GAGATCTGTC GCTGCCTCGA CGGGCTTCCC
CTCGCCATCG AGCTGGCCGC CGCCCAAACC GTCAGTCACA CCCCGCAGGA AATCCGCGAG
CGTCTCGACG ATCAGCTCGG CTTGCTGGTC GGCGGACGGC GGACCGGGGC GGACCGGCAC
CGCACCATGC GCGCCACGAT CCAGTGGTCC TACCGGCTCC TCACCGTGGC CGAACAGGAC
CTGCTGCAAC GGCTGTCGGT GTTCGCCGGC CCAGTCGACC GGGCCGGAGC TGCGGCCGTT
GCCGCCGGCA GCGGCCTGGA TGTCAACGAC GTGCTGCACA CTCTCGTACA GCGCTCGATG
GTTACCGCCG AACCCGGCCG GTTCGGCCAG CAGTTCAGGC TGCTGGAACC AGTCCGCCAG
TTCGCAGCCG AACACCTCGC CGCAGGATCG GCGGCCGCAC CCGCCCAGGC CGCGCACACC
CGATACGTGC GGGAACGGGT GACCTCGCTG CACGACCAGC TCACCGGAAC CGCCGAAATC
CAGGGGGTCG CCCATCTGGA CGAGCTGTGG CCCAACCTGC GCGTAGCGGT TGACCGGGCC
TTTGCCTGCG GCGACTACCG CCTCGCCCAT GACCTGTTCC GGCCGATCGG CACCGAGGCC
CTCCGGCGGC ACCGGCACGA AATCGGGCAG TGGGCGCAAC GCCTCCTTGA ACAGGCACCG
GCTGAGGATC GGCCGCGGGT CGTGGCCGGC CTGATCGCCG CCGGACCCCG GTATCACCTC
CGTCAGGACC CGGCCGGGTT CGACACCTTG GTCAGGCAGT ACGGCGATCC GGACGATCCG
GTGGCCCGGC ACATGCGGGC CAACGTCCAC GACGACTACG CTGCTCAGAT TCACTCGGCG
CCGCAGGCGC TGGCCGAGCT GCGCCGGCTC GGCGCCGACG ATCTCGCCGC GCATGTCGAG
GTCGACCTCG GCGCAGCGCT GGTCTTTCAG GGACAGTATG CCCGCGGAGA CACCAAGCTC
ACCGAACTCG CCGACCGGTT CCGCAGCGAC GGCCCGCCCA CCCTGCTGAA CTGGACGTTG
ATGCTGCTCG GCTTCTCAGC CGCCTTCCAA GGTAGACGGG CCGCCGCGGA CCAGTTGTTC
GACCAGGCTG TCGACGTGCC GCTGCCGGTA CGCACCCACT CGCCGAACCA GTCCGTGCGT
GCCCAGGCGC TGTTCCGGCG CGGCGATCGT AGAGCCGCCT ACCAGCTACT CCGTGCCCAC
GTCGAAGAAC TGCTCGACGC CGACAACATG CACGGTGCCT GCGTCGTATC GATCAGCTTC
GTCACGATGA TGCCGGCAGT GGCACGCTTC GCCGAGGGCG CCCGGGTCCT GGCCTTCCTC
GACACCGCCG GCCTGCTCGA CAATGTGGCC TGGGCGGCCA TGGTCGCCGA CGCCCGGGAC
GAACTCGCCA CCTTCGCCCC TGCCTTTGAC GAGTCCACGA TCGCTGATCA ACGGCAGGCC
CTCGTCGCGA TCGGCGACAC TCTCGACGAC CTTCTTGCCG AACAGACCAG CCGGCCAGAT
GCTAACTCGA TCTTTAACCT GCTGGGCGGT GGCATCGACC CCAGACGATC ATGGGAACAG
TCCCTTGATT GA
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| Protein sequence | MAGPAVRIRL LGGVEVVDGS GTAVDIGAGK CRALLAALAM QPGRAIPDWR LIDLLWGEQP
PRTAVRTLQS YIARLRGGLG AGRIVRSGAS YRLDVPADAV DVIRFGRRVE AGDVAGALAE
WTGDPLAGVP VPGLAATVDG LVEQWLGAVE ADLTARVDAD AAATVGPLTE LSARYPFREG
LWALLMTALY RVGRQADALT AYRTARQQLV EHLGVEPGPR LRRLESAILD QDPRIGGERR
SEPVHRLPRR AVRLIGRDGD LDLIGRALDE SPVVTLVGPG GIGKTALAVA AAQRTRLEHG
AWLVDLTEIT TDQDVPQAVA AAVRVEEGPG RSLSESIVLS LSSLRALLVL DNCEHVADGA
ARLAQAVADG CPQVRVLATA REPLGLSHGH ERLVAVTPLP AAGAGADLFA ERANALTAAF
TTGAAREVIE EICRCLDGLP LAIELAAAQT VSHTPQEIRE RLDDQLGLLV GGRRTGADRH
RTMRATIQWS YRLLTVAEQD LLQRLSVFAG PVDRAGAAAV AAGSGLDVND VLHTLVQRSM
VTAEPGRFGQ QFRLLEPVRQ FAAEHLAAGS AAAPAQAAHT RYVRERVTSL HDQLTGTAEI
QGVAHLDELW PNLRVAVDRA FACGDYRLAH DLFRPIGTEA LRRHRHEIGQ WAQRLLEQAP
AEDRPRVVAG LIAAGPRYHL RQDPAGFDTL VRQYGDPDDP VARHMRANVH DDYAAQIHSA
PQALAELRRL GADDLAAHVE VDLGAALVFQ GQYARGDTKL TELADRFRSD GPPTLLNWTL
MLLGFSAAFQ GRRAAADQLF DQAVDVPLPV RTHSPNQSVR AQALFRRGDR RAAYQLLRAH
VEELLDADNM HGACVVSISF VTMMPAVARF AEGARVLAFL DTAGLLDNVA WAAMVADARD
ELATFAPAFD ESTIADQRQA LVAIGDTLDD LLAEQTSRPD ANSIFNLLGG GIDPRRSWEQ
SLD
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