| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0487 |
|---|
| Symbol | |
|---|
| ID | 5056926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 562421 |
|---|
| End bp | 563698 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640472760 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157350 |
|---|
| Protein GI | 145593053 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.681739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA GCGCAAAAGT GCTTACTACC CGCGCTGCCG CGACCGCTGC GGTAGCCGCC
GCCACCGCCA TCGTGATGAT GGGCAACGTG GTCAGCGCCG CACCCGTCGG TCCGATCGAC
CCCGTCGAGG CCACCGAGGG CTTCCTGGTC ATGACGGAGG GAAACGCGAC CTTGATCGAT
ACGGAGAACG AGGGGACGCT GGCCGTCGGC GGAAACCTCG CGTTCTCGCA GTACCAGTTG
GCCGTGGTGA GCGCGGGAAA CTTCTTCGCC CCCGGCGAGA ACAACCCCAC GGCGCTCGTC
GTGGACGGGC AGGTGGACTT CCTGAACAGT GTGCCCGGCA CCCGCCTCCA GGTCCTCCAG
AATGGATTTG CCAAGATCGG AAACCTGAAC GGCACCTTCG TTCGGGATGT TGACAACAAC
AACGCACCGG CGAATACGCG GATCCTGCCG GCCAACGACT ACGACGCCTT CCCCCGGATC
GAACTCGTCA CCAGCCAGTC GGTAGCGAGT GTCGGGCCGG TCTCGGTGAT CGACTTCGCG
GAGGCGTTCC AGACCTTCCG GTCGAACTCC ACCGAGCTCG CGACGTGCCA GAACACCGTC
GTGCTGCGGG ACCCGAACGG CGACCCGATC TCCTCCCCCA TCCCGCCCGG GACCAACGCC
GTCATCAACC TGAGCCCGAA CACCACCAAC GTACTCAACA TCACCTCAAC CGATCTGGAC
AACATCAGCG TCCTGACCTT CGCCGACCAG CCGACCGCGA GCAGCCCGTT GTTGGTCAAC
GTCAACACCA CCGACGTGGG GAATGCCTTC GCCTGGACCG CACCGAACTT CGCCGGCGTC
GGCGGACCCG AAGCCCGGTT CATCCTGTTC AACTTTCCCA CCGCCACCAC CCTCACCCTC
GCACCCGGCG GCGCCACGGT CGAAGGAACG ATCTACGCGC CACGGGCCGA CTACACCGAT
CTCGACCAGA GCAACACCGA AGGCAGCATC ATCGCGCGCT CCCTGGAACA CCGCGGCGGG
GAAATCCACG ACTACCCCTT CAGCACGACG CTCGCCTGCG ACAGCGGATC CCCGACGGCC
AGCCCGACGG TGACACCGAC CGCCGATCCG ACGATGACGC CAACCGTCAC GCCAAGCCCG
ACCGGGACCG ACCTACCAAT CACCGGATCA TCCAGCGGGT CAATGCTCTT CGTCGGCAGC
CTGGCCGTGC TGACGGGCAC CGGCCTCCTG CTCACGCTCG TTCTCACGCA CCGGCGACGT
CGCAACGTCG GAAGCTGA
|
|---|
| Protein sequence | MNKSAKVLTT RAAATAAVAA ATAIVMMGNV VSAAPVGPID PVEATEGFLV MTEGNATLID
TENEGTLAVG GNLAFSQYQL AVVSAGNFFA PGENNPTALV VDGQVDFLNS VPGTRLQVLQ
NGFAKIGNLN GTFVRDVDNN NAPANTRILP ANDYDAFPRI ELVTSQSVAS VGPVSVIDFA
EAFQTFRSNS TELATCQNTV VLRDPNGDPI SSPIPPGTNA VINLSPNTTN VLNITSTDLD
NISVLTFADQ PTASSPLLVN VNTTDVGNAF AWTAPNFAGV GGPEARFILF NFPTATTLTL
APGGATVEGT IYAPRADYTD LDQSNTEGSI IARSLEHRGG EIHDYPFSTT LACDSGSPTA
SPTVTPTADP TMTPTVTPSP TGTDLPITGS SSGSMLFVGS LAVLTGTGLL LTLVLTHRRR
RNVGS
|
|---|
| |