Gene Strop_0476 details

Gene Information

• Locus tag: Strop_0476
• ID: 5056915
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora tropica CNB-440
• Kingdom: Bacteria
• Replicon accession: NC_009380
• Strand: -
• Start bp: 542592
• End bp: 543353
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640472749
• Product: hypothetical protein
• Protein accession: YP_001157339
• Protein GI: 145593042

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.00963036
• Fosmid Hitchhiker: No
• Fosmid clonability: decreased coverage

Sequence

Gene sequence

ATGATCAGCC GTGACGAGGC GCTGGCTCGC GCCCGGCGGT GGGCCGCCGC CGGCCGGCCC 
GGCCCGCCCC CAGAGGTCGA CTTCTACGAG TTCGACCTCG GCTTTGTCGC CTCCCGCCGC 
GAACCCCTGC GGTTTGCACC GGACGGAACG CCCAAGCCAC CGTCAGCAAC CGGACAGCCC 
ACCGTGGTAA TCGACCGGGG AACCGGAAGA CTGTCGAGCT GGCCGCCGCT ATCCAATCAG 
GAAATTGCTG AGTGGTATGG GAAGTACCAC GCGGCCGAGG GTCGCTTTCC ACCCGACGTG 
CGTGAGGTCT TGGACCAGGC CGGATGGTTC CCCGGTCGGG ACATGACCGC CGCCGTCGAC 
CTCTGGCTGG CTCGCTTCGC CGACGAGCTC GCCGGCTTGG AGTGCTTCCC CGCCGTGCGG 
GCTGCCCTAA TCGAGTTCGG TGGACTCATC CTTCCCCAGT TGGGCAGAAG TGGGGAACCC 
GGCGCCGGAT TCGCCAGCGG CATCCAACCC ACCAGGACTG GGGGGGTCCT AGCCGACTGC 
TCCGAGATCT TCGCTGAGGA GTTCAACAAT CCCGTCTTCC CTCTCGGCAA CAATGCCGAC 
GGCCCCTCCG AGCTTGTCAT GGACGCTCAG GGGCGGGTCT TCCAACTACA TTGGGCCGAC 
GACTTCTTCA TCGGCCCAGA CATCGACACC GCTATCATCG CCCTCATTCG CGGTGGACGA 
ATGCCCGCAG CCAGCGACCT CACCTGGCGG ACCGACAACT AG 

 

Protein sequence

MISRDEALAR ARRWAAAGRP GPPPEVDFYE FDLGFVASRR EPLRFAPDGT PKPPSATGQP 
TVVIDRGTGR LSSWPPLSNQ EIAEWYGKYH AAEGRFPPDV REVLDQAGWF PGRDMTAAVD 
LWLARFADEL AGLECFPAVR AALIEFGGLI LPQLGRSGEP GAGFASGIQP TRTGGVLADC 
SEIFAEEFNN PVFPLGNNAD GPSELVMDAQ GRVFQLHWAD DFFIGPDIDT AIIALIRGGR 
MPAASDLTWR TDN