| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0474 |
|---|
| Symbol | |
|---|
| ID | 5056913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 537101 |
|---|
| End bp | 541057 |
|---|
| Gene Length | 3957 bp |
|---|
| Protein Length | 1318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640472747 |
|---|
| Product | cell divisionFtsK/SpoIIIE |
|---|
| Protein accession | YP_001157337 |
|---|
| Protein GI | 145593040 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0770518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00818473 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCG TCGTTGTGAA GCGCCCGGCC CGGCAGCCGG AGCCGGAGTA CCCGTCCGGC
GAGGTCTTGC TGGAGGGGCC GCCGGAGGTG CCCGGGCCGA GCGGGCGCGG CTGGGGTCAG
ATGTTGATGA TGCTGCCGAT GCTCGCCGGT TCGTTCGCAA TGGCGCTGAT GTTCGCTGGC
CGGGGTGGCA GCACCCTCGG CTATGTCACC GGAGGTCTCT TCGGTCTCTC CGCGATTGGG
ATGCTCGGTT CCCAACTCGC GAACAACTCG GGTGGTCCGA GCAAGCAAGA AATGCTCCAG
AGGCGACGTG AGTACATGAC GCACCTGTCA CGGCAGCGCC GGCGGGTACT CAAGACGGTC
CGAAAGCAGC GAGACGCTGC TCACTACCGG CATCCGGAGC CAGAGTTGCT GTGGTCTGTG
CCGATCGGAC CTCGGTTGTG GGAGCGCCGG CGAGCGGACG TTGACTTCGG GACAGTCCGG
ATCGGGCTCG GCCCGCAGGA ACTGGCCACC CCGCTGGTAC CGCCGCCGGC AACGGCGTTG
GAAAAGCTGG AGCCGATGTG CGCCCTGGCG CTACGTCGCT TCCTGACGAC CTACGGGGAG
GTGCCGGACC TACCGGTGAC CATGGCGCTC AACGGCTTCG CCCGGGTGCA CCTACGCGGG
GATGACGATG CGGTCCGAGG GCTGGTCCGG TCGGTGCTCG CCCAGGCCGC CGCCTTTCAC
GCACCGGACG ACCTGCTTGT CGCGGTCTGT GTCGCCGCTG ATCGCCGGGA CGCGTGGGAG
TGGACAAAGT GGCTCCCACA CGCGCTGCAC CCGAGCCGCA CCGACGCCCT GGGGCAGCTG
AGGCTCGTCA CATCCTCGGT CGCCGGGTTG GAGGCGATGC TCGACGACGT GCTGGCCAGC
CGGCCCCGGT TCAGCTCCAT CGGCGGAGCG GCTCAGGTGG GCGGGCCGCA CGTCCTGGTC
GTCATCGACG GCGGCGACAC CGCCGGATCG GACCACCTGA TGACCGACGG CGGTGTGGAG
GGCGTCACCC TTCTCGACCT CTCCAACCCG GCACCGCGGC TACTGGACCG CGCCCGGCTG
GTGCTGGAGG TCACCCCCGA CCTGAAGCTC CTGAGTACCA CTGTGGATGG TGTCGCCGAG
ATTGGTCGGG CAGACCAGTG CCGGATTACG GAGATCGAGA CGCTCGCGAT GCAGCTGACC
CCACTACGCC TCTCGGCTGC CTCCCGGGGC GGCGACAGTC CGCTCACCGC CGAGCTGGGC
CTGGCCGCGC TGCTCAACAT CGGCGACCCA CACGAGTTCG ACCTGGAGGC GGCCTGGCAG
CCCCGGCCGA ACCGGGACCG GCTACGGGTG CCCATCGGTA CGGGTACCGA CGGTGCTTCG
GTCGAACTCG ACCTCAAGGA GTCCGCGCAG GACGGCATGG GCCCGCACGG CCTGCTGATC
GGTGCGACCG GCTCCGGCAA GTCCGAGCTG CTGCGTACGC TGGTGCTGGC GCTCGCGGCC
ACGCACAGCT CGGAGAGCCT GAACTTCGTC CTGGTCGACT TCAAGGGTGG CGCGACCTTC
ACCCGCTTGG ATGCCCTCCC ACACGCCAGC GCGGTCATCA CCAACCTCGC CGACGAGCTG
CCGCTGGTTG ACCGGATGAC CGACTCCATC AACGGTGAGC TGGTACGCCG GCAGGAGTTG
CTGCGCGCGG CCGGCAACTA CGCCTCGCAG CGCGACTACG AGAAGGCCCG GGCCGCCGGA
GCGCCCCTGG CTCCCCTGCC GAGCCTGCTC ATCATCTGCG ACGAGTTCTC CGAGCTCCTC
ACCGCCAAGC CGGACTTCAT CGATATGTTC GTACAGATTG GTCGGGTTGG TCGGTCGCTC
GGTGTCCACC TGCTACTGGC CTCACAGCGG CTGGAGGAGG GCCGGCTGCG GGGTTTGGAC
ACCCACCTGT CGTACCGGAT CGGGCTGCGG ACCTTCTCCG CCATGGAGAG CCGGGTGGTG
CTCGGCGCCA CCGACGCGTA CGAGCTGCCC CGTTCACCAG GCCACGGATA CCTACGCTTT
GGTACCGAAC CGCTGGTCCG CTTCAAGGCC GCGTACGTCT CCGGCGCCTA CCGAAGCGAG
ATGGCGGTGG CGGTCGCTGC TGGGGACAGC GAGGCGCGGG TGCAGGAGTA CGGCACCAGC
TACGTCGCGC CGCCGGTGAC TCCTACCGAA GCGGAGGTGA CGCCGGAACC GGCCGAACCG
GGCGGCGACA GCCTGCTGGA CATCCTGGTC GGTCGGCTCA CCGGCCGGGG CACGCCGGCC
CACCAGGTGT GGCTGCCCCC GCTCGCGGAG CCGCCGACGC TGGATCAGCT CCTGCCACCG
TTGACCGCGG ACCCGGACCG GGGAGTGACG GTGGCGCACG CTGCTCTGGT GGGCGAGCTC
CAGGTGGCCA CCGGCATCGT CGACAAGCCG TTCGAGCAGC GTCGAGACGT GCTCTGGTTT
GACCTGGCCG GCGCGGCCGG CCACGCGGTG ATCGTGGGTG GTCCGCAGAG CGGCAAGAGC
ACCCTGCTGC GGACGATCGT CACCTCGCTG GCGCTGACCC ACACGCCACG TGAGGCTCAG
GTCTACTGCC TCGACCTGGC CAGCAACGCG CTCTCCTCAC TGCGCGGACT GCCGCACGTC
GGCGCGGTGG CGACCCGGCT CGACGCTGGT CTGGTCCGGC GCACGATCGC CGAGTTGCAG
CTGCTGATGG GCGAGCGAGA GCGACGGTTC GGTGAGCGCG GGGTGGACTC GATGGCCGCG
TACCGGCACG CTCGTCGGCA CGGCCAGCAC ACAGATGACC CCTTCGGCGA TGTCTTCCTC
GTCATCGACG GCTGGTCCAC CATCCGTACC GAATTCGAGG ACCTCGAGCC GGCGATCAGT
GACATCGCCA ACCGCGGGCT CTCGTTCGGC ATTCACCTGA TCGTCACCGC TGGACGCTGG
ATGGACCTGC GCCCTGCCGT TCGGGATGTC TTCGGCACCC GACTGGAGCT CTGGCTGGCG
GATGCGGGCG ACTCCATGCT GGATCGGCGG GCCGCGATGA ACGTGCCGGA GAAGTCTCCC
GGTCGAGGAA TCACCCCCGA CGGTCAACAC CTCCTCGCCG CACTGCCCCG CGCCGACGGC
TCTCAGGAAC CGGAGAGCCT ACCCGAGGGT TCCCGCAAGC TGATCAACGA CCTCGCCGCC
AGCTGGGAGG GACCGGGAGC TCCGCCGATC CGGCTCCTTC CGCCGGTGGT CCCGTTTGGC
AGTCTGCCGG CCACCGGGCG ACCCGGCATT CCGATCGGCA TCGCCGAGGT GGATCTCCAG
CCGGTGCACC TGGACTTCGC CACCGACCCG CACTTCCTTG TCTTCGGCGA CGGGGAGTCC
GGGAAGAGCA CCTTCCTGCG GGCGCTGGCA CAGACGATCG TCGACCGCAA CGAGCTGAAC
GAGGCTCGGC TGGTTCTCGT CGACTACCGC CGCAGCATGC TCGGCGACAT CACCACCGAG
CACCTGATCG GGTATGGATC GTCGGCGCAG CTCACCGAGA ACATCATCGC CGAGGTGGCC
GCCGTGATGC GGGACCGGCT TCCCCCCGCC GACGTGAAGC CCGACGAGCT GCGGGCTCGC
AGCTGGTGGA AAGGCCCCGA CCTCTACGTC CTGGTGGACG ACTACGACCT GGTGGCCGGG
GCGGGCAGCA ATCCGCTGAC CCCGCTGCTG GAGTTTCTGC CGCAGGCCCG GGACATCGGT
CTGCACCTGG TCGTCGCCCG CCGCACCGGC GGCGCGAGCC GGGCCCTCTA CGAGCCGGTG
CTGATGCGGC TGCGTGAGAT CAGCACCCCG GGCATCGTCA TGTCCGGCAA CCGGGAGGAG
GGGGTGCTGC TCGGCACCGT ACGCCCCGGA CCACTGCCAC CAGGTCGGGG CTGGCTGGTC
ACCCGGCGGG AGGGCACCCG CCTGGTGCAG TTGCTGGACC TTCCGTCCCA GGTGTGA
|
|---|
| Protein sequence | MSTVVVKRPA RQPEPEYPSG EVLLEGPPEV PGPSGRGWGQ MLMMLPMLAG SFAMALMFAG
RGGSTLGYVT GGLFGLSAIG MLGSQLANNS GGPSKQEMLQ RRREYMTHLS RQRRRVLKTV
RKQRDAAHYR HPEPELLWSV PIGPRLWERR RADVDFGTVR IGLGPQELAT PLVPPPATAL
EKLEPMCALA LRRFLTTYGE VPDLPVTMAL NGFARVHLRG DDDAVRGLVR SVLAQAAAFH
APDDLLVAVC VAADRRDAWE WTKWLPHALH PSRTDALGQL RLVTSSVAGL EAMLDDVLAS
RPRFSSIGGA AQVGGPHVLV VIDGGDTAGS DHLMTDGGVE GVTLLDLSNP APRLLDRARL
VLEVTPDLKL LSTTVDGVAE IGRADQCRIT EIETLAMQLT PLRLSAASRG GDSPLTAELG
LAALLNIGDP HEFDLEAAWQ PRPNRDRLRV PIGTGTDGAS VELDLKESAQ DGMGPHGLLI
GATGSGKSEL LRTLVLALAA THSSESLNFV LVDFKGGATF TRLDALPHAS AVITNLADEL
PLVDRMTDSI NGELVRRQEL LRAAGNYASQ RDYEKARAAG APLAPLPSLL IICDEFSELL
TAKPDFIDMF VQIGRVGRSL GVHLLLASQR LEEGRLRGLD THLSYRIGLR TFSAMESRVV
LGATDAYELP RSPGHGYLRF GTEPLVRFKA AYVSGAYRSE MAVAVAAGDS EARVQEYGTS
YVAPPVTPTE AEVTPEPAEP GGDSLLDILV GRLTGRGTPA HQVWLPPLAE PPTLDQLLPP
LTADPDRGVT VAHAALVGEL QVATGIVDKP FEQRRDVLWF DLAGAAGHAV IVGGPQSGKS
TLLRTIVTSL ALTHTPREAQ VYCLDLASNA LSSLRGLPHV GAVATRLDAG LVRRTIAELQ
LLMGERERRF GERGVDSMAA YRHARRHGQH TDDPFGDVFL VIDGWSTIRT EFEDLEPAIS
DIANRGLSFG IHLIVTAGRW MDLRPAVRDV FGTRLELWLA DAGDSMLDRR AAMNVPEKSP
GRGITPDGQH LLAALPRADG SQEPESLPEG SRKLINDLAA SWEGPGAPPI RLLPPVVPFG
SLPATGRPGI PIGIAEVDLQ PVHLDFATDP HFLVFGDGES GKSTFLRALA QTIVDRNELN
EARLVLVDYR RSMLGDITTE HLIGYGSSAQ LTENIIAEVA AVMRDRLPPA DVKPDELRAR
SWWKGPDLYV LVDDYDLVAG AGSNPLTPLL EFLPQARDIG LHLVVARRTG GASRALYEPV
LMRLREISTP GIVMSGNREE GVLLGTVRPG PLPPGRGWLV TRREGTRLVQ LLDLPSQV
|
|---|
| |