Gene Strop_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0454 
Symbol 
ID5056893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp516489 
End bp517244 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content72% 
IMG OID640472727 
ProductABC transporter related 
Protein accessionYP_001157317 
Protein GI145593020 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAG TCAGCGTGGC CGGCCTGCGG GTCAGCTACG GAAAGCGGGT CGTCCTCGAC 
GACCTGGCCA TCGAGCTGGG CGTGGGCGTG CACGGGCTGC TCGGCCCGAA CGGTGCCGGC
AAGACGACCC TGATGCGAGT GCTGGCCACG GTGCTGCGCC CGGATCGGGG GGAGGTCCGG
CTGCTGGGGC ACCGCACTGA CGACCGGGTG GGGCTGCGCC AGGCCCGTCG CCGGTTGGGC
TACCTGCCCC AGGCGTTCGG CTTCTACCCG CGCTTCACTG TCCGGGAGTT CGTCGAGTAC
TTCGCCTGGC TGCGGGAGAT GCCGGCGGCG CGGATACCGC TCGCGGTGGA TCGGGCCATC
GAGCGGGTCG GCCTGCTCGA CCGGGCGGAT GACCGGATGA AGCACCTCTC CGGCGGAATG
CTGCGGCGCG CCGGTATCGC CCAGGCCATC GTGAATGACC CGCGGGTGTT GCTGTTGGAT
GAGCCGACGG CCGGGCTGGA CCCGGAGCAG CGGGTGGAGT TCCGAACGCT GCTGCGGGAG
CTGGGCCTCG ATGCCGTGGT GCTGGTCAGC ACGCATCTGG TCGAGGATGT CGCGGCGGCG
TGCGCGCGGG TCAGCCTGGT CGACGACGGG CGACTGGTCT TCGCCGGACT CCCGGGGGAG
CTGATCGCGG CCGGCGGGGA CGGCGACAGC GGTGACTCCC CGATTGAGCG GGGCTACACG
GCGGTGTTGC GCGGCGCGCG GCAGGTGACG CGGTGA
 
Protein sequence
MTTVSVAGLR VSYGKRVVLD DLAIELGVGV HGLLGPNGAG KTTLMRVLAT VLRPDRGEVR 
LLGHRTDDRV GLRQARRRLG YLPQAFGFYP RFTVREFVEY FAWLREMPAA RIPLAVDRAI
ERVGLLDRAD DRMKHLSGGM LRRAGIAQAI VNDPRVLLLD EPTAGLDPEQ RVEFRTLLRE
LGLDAVVLVS THLVEDVAAA CARVSLVDDG RLVFAGLPGE LIAAGGDGDS GDSPIERGYT
AVLRGARQVT R