| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0451 |
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| Symbol | |
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| ID | 5056890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 514356 |
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| End bp | 515057 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640472724 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_001157314 |
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| Protein GI | 145593017 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACGATT TCCGGCAACC GCCGATCACC CTGGACCGGG TGACGACCAG CCGGGGTGAA
CTGGTGCTAC GCGAGACGAA CGGCCGCTAC GAGGTCATCA GCAACGGTGT CTTCCTGATG
GACACCGCGG ACGGCCGGTC CGAGCGACTG CTGGTTGACG CGGCGGTGAG CAGGTGCACG
GGCCCGGCGC CCCGGCTGCT CATCGGCGGT CTCGGCGTCG GGTTCTCGCT GCTGCGCGCG
GTCGAGCACC CACACGTCGC CGCCATCGAC GTCGTTGAGA TCGAGGCCAC CGTGATCGGC
TGGCACGCCC GCCACCTGCG CCCCCTCACC GGCGCCGCGC AGGCCGACCC CCGGGTACGG
ATCGTCGAGG CGGACATCCT CGCCTGGTTG GCCGACACCG CCGACCAGTA CGACGCCATC
TGCCTGGACA CCGACAACGG CCCCAACTGG CTGGTCTTCG AGGCCAACGC CGAGTTGTAC
GCCCACCGTG GGCTCGACCT GGTGGCCGGC CGGCTCCGAC CGGGGGGTGT CCTGGCGATC
TGGAGCGCGA GCCGGGACGA CGCCTTCGAG CAACGACTCC GGGAGCGCTT CGGCGACCTG
GAGCTGCTGG AGACACCGAC CGATGCAGGC GCACCGGACG TGGTCTACCT CGTCCGGGCT
GCCACCGCGG CGCCGGGGGA GCTACCGGAG TCGCCGGCAT GA
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| Protein sequence | MHDFRQPPIT LDRVTTSRGE LVLRETNGRY EVISNGVFLM DTADGRSERL LVDAAVSRCT
GPAPRLLIGG LGVGFSLLRA VEHPHVAAID VVEIEATVIG WHARHLRPLT GAAQADPRVR
IVEADILAWL ADTADQYDAI CLDTDNGPNW LVFEANAELY AHRGLDLVAG RLRPGGVLAI
WSASRDDAFE QRLRERFGDL ELLETPTDAG APDVVYLVRA ATAAPGELPE SPA
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