Gene Strop_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0439 
Symbol 
ID5056878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp502962 
End bp503609 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content72% 
IMG OID640472712 
Productdienelactone hydrolase 
Protein accessionYP_001157302 
Protein GI145593005 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAC GGAGTGAGGT GCCGGTGCCG GCGGGGGATG TCCAGCTCAC GGCTGATCTT 
CTGGTGCCGG CGGAGCCGGT CGGAGTGGTG CTCTTCGCAC ACGGCAGCGG TAGCTCCCGG
CGGAGTCCCC GTAATGTCGC GGTGGCGCAG GTTCTCCATC GCAGCTCGCT CGGCACCGTA
TTGGTCGACC TGCTCACCCC GGATGAGGAG GCGGTCGACG CGCGAACCGC GCAGCTCCGG
TTCGACATCG GCCGGTTGGC CGGAAGGTTG TCCGCGATCG TCGACTGGCT GGAAACCGGA
GCGCCGATGG GTGTGGTGCC GATTGGGCTC TTCGGGGCCA GCACCGGGGC TGCTGCCGCC
CTGGTGGCCG CCGCCGAGCG CCCCGACGCG GTCGGCGCAG TGGTCTCCCG AGGCGGCCGG
CCGGACCTTG CCGGCCCGGC GCTGGGCCGG GTGCGAGCGC CGACCCTCCT GCTCGTGGGG
GGCCTCGACG ACCAGGTGCT CACCCTGAAT GAGCAGGCTC GGGAGGCGCT GCCGGAGCAG
GCGGAGCTGA CGGTCGTCCC CGGTGCCGGG CACCTGTTCG AGGAGCCCGG TGCGCTGGAG
CAGGTGGCGC ACGCGGCGGC GACCTGGTTC ACCGACTACC TTGGGTGA
 
Protein sequence
MDARSEVPVP AGDVQLTADL LVPAEPVGVV LFAHGSGSSR RSPRNVAVAQ VLHRSSLGTV 
LVDLLTPDEE AVDARTAQLR FDIGRLAGRL SAIVDWLETG APMGVVPIGL FGASTGAAAA
LVAAAERPDA VGAVVSRGGR PDLAGPALGR VRAPTLLLVG GLDDQVLTLN EQAREALPEQ
AELTVVPGAG HLFEEPGALE QVAHAAATWF TDYLG