Gene Strop_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0427 
Symbol 
ID5056866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp487601 
End bp488203 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID640472700 
Productnitroreductase 
Protein accessionYP_001157290 
Protein GI145592993 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.693238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTCG TCGAGGTGGT CCGGCGTCGT CGGATGGTCC GTAACTACGA TCCGGATCGA 
CCGGTCCCGC CGGAGGTGGT GGACCGCCTG TTGGCGCACG CGATCCGGGC GCCGTCGGCG
GGCTTCTCCC AGGGGTGGGG TTTCCTGGTG TTGGAGACCG CCGAGGACCG GGATCGTTTC
TGGGCGGCGA CCACGCCGGG CACGGGCGGT CGGGAACGTT GGCTGGCCGG AATGCGTCGG
GCCCCGTTGA TCATCGTGCC GCACGCCAAC CGGTCGGCGT ACCTGGAGCG GTACGCGGAG
CCGGACAAGG GGTGGGCGGA TCGGTCGGAG AAGCACTGGT CGATGCCCTA CTGGTATATC
GACACCGGCT TCGCGGCGTT GTTGATGCTG CTCACCGCCG TTGATGAGGG TCTTGGGGCG
TGTTTTTTCG GTATTCCGCC CCAGCGGCTG GAGGACTATC GGATGGCTTT CGGGGTGCCG
CTGGAGTATG AGCCGGTCGG CGCGGTCACC ATCGGTTACC GTGCGAGTGA CCAACGATCG
CCGTCGCTGC GCCGAGGACG TCGCCCGGTG GACGAGGTGG TCCGACGTGG CCGATGGAAT
TAG
 
Protein sequence
MEFVEVVRRR RMVRNYDPDR PVPPEVVDRL LAHAIRAPSA GFSQGWGFLV LETAEDRDRF 
WAATTPGTGG RERWLAGMRR APLIIVPHAN RSAYLERYAE PDKGWADRSE KHWSMPYWYI
DTGFAALLML LTAVDEGLGA CFFGIPPQRL EDYRMAFGVP LEYEPVGAVT IGYRASDQRS
PSLRRGRRPV DEVVRRGRWN