Gene Strop_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0425 
Symbol 
ID5056864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp485351 
End bp486643 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content73% 
IMG OID640472698 
Productmajor facilitator transporter 
Protein accessionYP_001157288 
Protein GI145592991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGG TGCGGGCGGC CCGGCGGCAG AGCAGCCGGT GGGCGATCGA CCTGCGTCCG 
CTGGCGGTGC CGGCGTTCCG CCGGATGTGG CTCGGCAACA CCATGGCGAT GCTCGGCTTC
CAGCTCACCG CGGTCGCCGT ACCGGTGGAG ATGTATGCCC TGACCGGGGA GTCCTTCTGG
GTCGGCCTGC TCGGCCTCGC CGGCTTTGTT CCCCTGCTGT TCTTTGGGCT CTGGGGCGGA
GCGGTGGCCG ACGCGCGGGA CCGGCGTCGG GTGCTGCTGG CCGGTTCGGC ACTGCTCTGG
ACCACGATGC TTGGCCTGCT GGCGCACGCC TCGCTGGGTG TGGGCAGCCC GGTGCTGCTG
CTGGCGCTGG TGGCCGTCCA CTCGGCCGGC TTCGCGATCA GCTCGCCGGC GCGAACTGCG
GCCCTGCCCC GACTGCTGCC ACCGGGGCTG GTCCCGGCGG CGGCCACACT GAACTTCACC
ACCTTCACGG CGGCCTCGGT GGTCGGCCCA CTCGCCGCTG GTCTGATCTT CGCGGTCACC
GGCACCGAGC GTGGGCTGCC GATCGCGTAC GCGGCGGACG CGCTCCTGTT CACCGGGTTG
GTGGTGGCCG CGCTGCGGCT GCCGGCGATG CCACCGGAGC CGCTCGGCGA CGGCGAGGTG
CGGCGCGGTG GGCTGGCGGG GATCCGAGAC GGACTCCGGT ATCTGACCAC CACGCCGGTG
CTGCTGCTGT CGTTCGCCAT CGACCTGATC GCGATGGTGC TGGCGCTGCC GCGGGCGTTG
TTTCCGGAGA TCGCCGAGGA GCGGTTCGGT GGTGGGGCGG CGGTCGGCTG GCTCTTCAGC
GCCATCGCGA TCGGCGCCAT GCTGGCTGGC CTCACCTCCG GCTGGATCAG CCGGCTGCGT
CGGCAGGGGC TTGGTCTCGT TGTGGTGGTG GTCGGCTGGG GTCTGGCGGT CGCGGCGGCG
GGGTTGGCCC AGCAGCTCTG GCTGATGGTC CTGTTGCTTG CGGTGGCCGG CGCGGCCGAC
CTGGTCAGCG CGGTGCTACG CCAGTCGATG CTGCTGGTCT ACGCGCCAGA CCGGATGCGG
GGCCGGCTTC AGGGAGTGAA CACGGTGGTC GTCGCCGGGG GGCCGCGCCT CGGTGACCTG
CGCGCCGGCG CGATGGCGGG TGGCTTCGGC AGCGGTGTCG CCTGGGTCGG CGGCGGTCTG
CTCTCGGCCG TACTCGCGCT CGGGCTGGCG GTGGCGTTCC CGGCCCTGAT CCGCTACCGG
GCGGCCGCTG TCGCCAGCGA GCAGCGGGTC TGA
 
Protein sequence
MTEVRAARRQ SSRWAIDLRP LAVPAFRRMW LGNTMAMLGF QLTAVAVPVE MYALTGESFW 
VGLLGLAGFV PLLFFGLWGG AVADARDRRR VLLAGSALLW TTMLGLLAHA SLGVGSPVLL
LALVAVHSAG FAISSPARTA ALPRLLPPGL VPAAATLNFT TFTAASVVGP LAAGLIFAVT
GTERGLPIAY AADALLFTGL VVAALRLPAM PPEPLGDGEV RRGGLAGIRD GLRYLTTTPV
LLLSFAIDLI AMVLALPRAL FPEIAEERFG GGAAVGWLFS AIAIGAMLAG LTSGWISRLR
RQGLGLVVVV VGWGLAVAAA GLAQQLWLMV LLLAVAGAAD LVSAVLRQSM LLVYAPDRMR
GRLQGVNTVV VAGGPRLGDL RAGAMAGGFG SGVAWVGGGL LSAVLALGLA VAFPALIRYR
AAAVASEQRV