Gene Strop_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0409 
Symbol 
ID5056847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp470127 
End bp470621 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content62% 
IMG OID640472681 
Productputative nucleotide-binding protein 
Protein accessionYP_001157272 
Protein GI145592975 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.67309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCA ACCCGTCGTT CGACATCGTG AGCAAGGTCG ACCGTCAGGA GGTCGACAAC 
GCCCTCCACC AGACGGAGCG GGAGCTCTCG ACGCGGTTTG ACTTCCGGGG CACCGGTGCC
GAAATCTCCT GGTCTGGCGA GGAGGCGATC AGCCTTCGGG CGGAGACCGA GGAGCGGGTC
AAAGCCGCGC TGGATGTCTT CAAGGAGAAG CTGGTCAAGC GGAACATCTC GCTGAAGTCA
CTGGACGCCG GAGACCCTCG CGCGTCGGGT AAGGAATTCA AGGTCGACTG CAAGGTGATC
CAGGGCATCG AGTCGGACAA GGCCAAGGCC ATCAGTAAGA AGATCCGCGA CGAGGGCCCG
AAGGGCGTCC AGGCGCAGAT CCAGGGTGAC CAGCTCCGCG TGACCGGCAA GAAGAAGGAC
GACCTGCAAG CCATCATCGC CATGCTGAAG GGCGAAGACT TCGGCGTCGC ACTCCAGTTC
ACCAACTACC GCTAG
 
Protein sequence
MAANPSFDIV SKVDRQEVDN ALHQTERELS TRFDFRGTGA EISWSGEEAI SLRAETEERV 
KAALDVFKEK LVKRNISLKS LDAGDPRASG KEFKVDCKVI QGIESDKAKA ISKKIRDEGP
KGVQAQIQGD QLRVTGKKKD DLQAIIAMLK GEDFGVALQF TNYR