Gene Strop_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0407 
Symbol 
ID5056845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp468293 
End bp469051 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content73% 
IMG OID640472679 
Producthypothetical protein 
Protein accessionYP_001157270 
Protein GI145592973 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.721096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTGG CGGGAGCACA GGACGCGGAG TTCGGCCACC AGGACCTGTC GCACCGGGCG 
GTGGCGCGTC TACTCGTCGT GCTCTCCGCC TCCTCCGGCT GCCTCGACGT GTTCTGTGTG
ACCCAGCTCG GCGGCTTCTT CGCCAGCGTG ATCACCGGCA ATCTGGTCCA GCTCGGCCAC
AATCTCGTCG CCGCCGACTC CCGCCTACTC ATCGGCGGGT CGGTGGCGGT CGGCGGCTAC
GCGGTCGGCG TGGCCGCCGG CACCCTACCG CTGCGCCACG CCGGGCTGGG CTGGCGTTTC
CGTACCCACG TGGTCACCGC GGCCCAGGTA CTGATCCTGG TCGGGGTGGC GGGTGGCTGG
TGGGCCACCG GGGGGCGACC CGACTACCCC GTTTCCCTGG CCCTGCTCTT CGCCGCCGCG
ACGGCCAGCG GGATACAGAG CGTGGTGACG ATCAGCTCCG GAATACCCCA CGCCGCCACG
ACGTACCTCA CCGGGTCGCT GACCTACATC GTGCGGGGAA TGGTCTTCGA CCCGCACCGG
TTCGCGGCGG GCGCGGCTGG CGCGAACCGG CTGCTGGGGC TCCTCGGCGG CGCGGTGCTC
GGCGCGGTGG TGCTGCGGGT CGCGCCGCTC TGGGCCCCGG CGCTGGCGGC GGCGCTGGTG
GCGTGGGTTC TGGCCACCGC GATCGCCATC AGCCGGTTAC ACCGTCGCGC CCATCCGCCG
TTAACGGAGG GGCCCGCGAG TCGGGGCCGG AATCGCTGA
 
Protein sequence
MRVAGAQDAE FGHQDLSHRA VARLLVVLSA SSGCLDVFCV TQLGGFFASV ITGNLVQLGH 
NLVAADSRLL IGGSVAVGGY AVGVAAGTLP LRHAGLGWRF RTHVVTAAQV LILVGVAGGW
WATGGRPDYP VSLALLFAAA TASGIQSVVT ISSGIPHAAT TYLTGSLTYI VRGMVFDPHR
FAAGAAGANR LLGLLGGAVL GAVVLRVAPL WAPALAAALV AWVLATAIAI SRLHRRAHPP
LTEGPASRGR NR