Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0407 |
Symbol | |
ID | 5056845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 468293 |
End bp | 469051 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640472679 |
Product | hypothetical protein |
Protein accession | YP_001157270 |
Protein GI | 145592973 |
COG category | [S] Function unknown |
COG ID | [COG3619] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.721096 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGTGG CGGGAGCACA GGACGCGGAG TTCGGCCACC AGGACCTGTC GCACCGGGCG GTGGCGCGTC TACTCGTCGT GCTCTCCGCC TCCTCCGGCT GCCTCGACGT GTTCTGTGTG ACCCAGCTCG GCGGCTTCTT CGCCAGCGTG ATCACCGGCA ATCTGGTCCA GCTCGGCCAC AATCTCGTCG CCGCCGACTC CCGCCTACTC ATCGGCGGGT CGGTGGCGGT CGGCGGCTAC GCGGTCGGCG TGGCCGCCGG CACCCTACCG CTGCGCCACG CCGGGCTGGG CTGGCGTTTC CGTACCCACG TGGTCACCGC GGCCCAGGTA CTGATCCTGG TCGGGGTGGC GGGTGGCTGG TGGGCCACCG GGGGGCGACC CGACTACCCC GTTTCCCTGG CCCTGCTCTT CGCCGCCGCG ACGGCCAGCG GGATACAGAG CGTGGTGACG ATCAGCTCCG GAATACCCCA CGCCGCCACG ACGTACCTCA CCGGGTCGCT GACCTACATC GTGCGGGGAA TGGTCTTCGA CCCGCACCGG TTCGCGGCGG GCGCGGCTGG CGCGAACCGG CTGCTGGGGC TCCTCGGCGG CGCGGTGCTC GGCGCGGTGG TGCTGCGGGT CGCGCCGCTC TGGGCCCCGG CGCTGGCGGC GGCGCTGGTG GCGTGGGTTC TGGCCACCGC GATCGCCATC AGCCGGTTAC ACCGTCGCGC CCATCCGCCG TTAACGGAGG GGCCCGCGAG TCGGGGCCGG AATCGCTGA
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Protein sequence | MRVAGAQDAE FGHQDLSHRA VARLLVVLSA SSGCLDVFCV TQLGGFFASV ITGNLVQLGH NLVAADSRLL IGGSVAVGGY AVGVAAGTLP LRHAGLGWRF RTHVVTAAQV LILVGVAGGW WATGGRPDYP VSLALLFAAA TASGIQSVVT ISSGIPHAAT TYLTGSLTYI VRGMVFDPHR FAAGAAGANR LLGLLGGAVL GAVVLRVAPL WAPALAAALV AWVLATAIAI SRLHRRAHPP LTEGPASRGR NR
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