Gene Strop_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0402 
Symbol 
ID5056840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp461632 
End bp462015 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content72% 
IMG OID640472674 
ProductNADH-ubiquinone oxidoreductase, chain 4L 
Protein accessionYP_001157265 
Protein GI145592968 
COG category[C] Energy production and conversion 
COG ID[COG0713] NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCCGG TCATCCCCTA CGTCACCGCC GCACTGCTGT TCGGGCTCGG CACGTACGGG 
GTGCTGCGTC GACGCAACGC CGTCCTGGTG CTGATCGCGG TCGAGTTGAT GCTGAACGCG
GTGAACCTGA TCCTGGTCAC CGCCGACACC ACGGTTCGCT CCCAGCTGCC GCACGGCGGC
CAGGTCTTCG CGCTGTTCGT GATCGTGCTG GCCGCCGCCG AGGTGGGCGT CGGATTGGCC
ATCGTGCTGC AGCTCTACCG GCTGCGCGCC AGCGTGGCCG TGGACGAGGT GCCGTTGGCC
GAGCCCCCGT CGCCGAACTC CCCGGCCGAG CCGTCAGCGC CGCCGCCCGC CGCGGCGGCC
ACCCCTGGGG AGGCAGACCG GTGA
 
Protein sequence
MRPVIPYVTA ALLFGLGTYG VLRRRNAVLV LIAVELMLNA VNLILVTADT TVRSQLPHGG 
QVFALFVIVL AAAEVGVGLA IVLQLYRLRA SVAVDEVPLA EPPSPNSPAE PSAPPPAAAA
TPGEADR