| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0388 |
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| Symbol | |
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| ID | 5056826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 447352 |
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| End bp | 448845 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640472660 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001157251 |
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| Protein GI | 145592954 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.991466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGC CGCCGGCTGG AACCGGTCCA CCTGCTGCTG GCTTCACCGC TGACCGGGCG
CCGGCCGGCG GCCCTGCCGG TCCGTCCGTA GCCGAGGCGC TGCCCCGCCG AGTGCACCTG
GGGTACGCCA CCGGGTCGCT GGCCACCGGG GCCTTCGGCA CCGTGCCCGG GCTGCTTCTG
CTGCCCTACC TGACCGACAC GCTGGGCGTG ACGGCGGGTA TCGCCGCCCT GCTCGTGCTG
CTGCCGAAAG CGTGGGACGT ACTGGTCAAT CCAGTCGCCG GCCGGATCTC CGACCGCACC
CGGTCCCGGT GGGGAGCGCG TCGCCCGTAC CTCCTGGGCG CCGGAGTCGC GCTTGCCCTC
TTCTTCGCCC TGATCTTCGC AGCGCCGTTC GGTACCGGGG CGGCGGCCGG CGGCTACGTG
GCGCTGGCCT TCCTGGCCAC CGCGACCGCG TTCGCCTTCT TCCAGGTTCC GTACGTGGCG
ATGCCGGCCG AGCTGACCAC CGGCTACACC GAGCGCACCC GGTTGATGAC CTGGCGGATC
GCGGTGCTGG CGCTGGCCAT CCTGGTCTCC GGCGCGGTGG CCCCGCTGGT GCGGGACGCG
GGCGGCGGCG GTATTTCCGG GCACCGCTGG ATGGGGCTCT TCGTCGCCGG CCTGATCCTG
CTCGGCGCGG TCGGGGCGTT CGTGGGCACC CGGTCCGCCC CGGTCGGCAT CGTGCAGGAG
AGCGAGCCGT CGTTGCGGGC CCAACTCGCA GTAGCCGGAC GTAACCGGGC TTTCCGGGCG
CTCCTGGCCT GCTTTGTGAT CCAGTCCGCC GGGGTGGCGA CGATCCTGGC CGGGGTGAAC
TACTTCGCCA CCCAGATCCT GCGCAATCCG GAGACCGGGC CCACCGTCCT GTTCGCCTGC
TTCGTCGGGC CGGCGCTGTT GGTCATGCCG GTGTGGAGCC GGATCGGGCA GCGGTTCGGC
AAGCTCACCG GGCTGATCGC CGCCGCGCTC CTCTTCGCCG CCGGTGCGCT GGCCCTGGTC
GCCGCCGAGC TGCTCCCCGC CGTCGGTATC TACCTGCTGG TCGCGCTGGT CGGCGTCGGG
TACGCCGGCC AGCAGGTCTT CGCTCTCGCC ATGTTGCCCG ACTGCATCGC CTACGACGAG
GCCCGTACCG GCCGACGGCA GGCAGGTGTG TTCACCGGAG TGTGGACCGC CGGGGAGACG
TTCGGGTTGG CGCTGGGACC GGGCATCTTC GGTCTGGTGC TCCAGCTCTC CGGCTACCTC
TCGTCGGACA CCGGAGCCGC CGCGACCCAG CCGGAGTCCG CCCGGCTCGG CATCCTCCTC
GGCTTCACCG TCCTCCCCGC CGTGATGGTC GGTGCCGCCA CCCTTCTGCT GCGCCCCTAC
TCCCTTACCT CCGCCGATCT CGGCACCGTC ATGGAGGAGC TGTCTTCCCG CGAAACTGGA
CACTCGGCGG GGAGTACGGT CACCGAAAAC CACGGAAAGG GCACCACTGG ATGA
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| Protein sequence | MDAPPAGTGP PAAGFTADRA PAGGPAGPSV AEALPRRVHL GYATGSLATG AFGTVPGLLL
LPYLTDTLGV TAGIAALLVL LPKAWDVLVN PVAGRISDRT RSRWGARRPY LLGAGVALAL
FFALIFAAPF GTGAAAGGYV ALAFLATATA FAFFQVPYVA MPAELTTGYT ERTRLMTWRI
AVLALAILVS GAVAPLVRDA GGGGISGHRW MGLFVAGLIL LGAVGAFVGT RSAPVGIVQE
SEPSLRAQLA VAGRNRAFRA LLACFVIQSA GVATILAGVN YFATQILRNP ETGPTVLFAC
FVGPALLVMP VWSRIGQRFG KLTGLIAAAL LFAAGALALV AAELLPAVGI YLLVALVGVG
YAGQQVFALA MLPDCIAYDE ARTGRRQAGV FTGVWTAGET FGLALGPGIF GLVLQLSGYL
SSDTGAAATQ PESARLGILL GFTVLPAVMV GAATLLLRPY SLTSADLGTV MEELSSRETG
HSAGSTVTEN HGKGTTG
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