Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0381 |
Symbol | |
ID | 5056819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 439183 |
End bp | 439821 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472653 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001157244 |
Protein GI | 145592947 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.336534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTG TGGGGAACGG TACCCAGACC GCCGGCCGGC CCACCCGCCT GCCCCGGTCC GCCCGCCGCA GACAGTTGCT CGCCGCGGCG CAGGAGGTTT TCGTCGCACA GGGCTACCAC GCGGCCGCGA TGGACGACAT CGCCGAACGC GCAGGGGTCT CCAAGCCGGT GCTGTACCAG CACTTCCCCG GCAAGATGGA GCTCTACCTG GCGCTGCTCG ACACGCACTG CGACATGCTC GTGGCGACGG TGCAGGAAGC GATGCGCGGC ACCCTCGACA ACAAGGAGCG GGTGAGCGCC TCCGTCCGCG CGTACTTCGA CTTCGTCGAC CATGAGAGTG AGTCGTTCCG CCTGGTCTTC GAGTCCGACC TTCGTAACGA CCCCGCGGTC CGCCAGCGGG TCGAGCGGGT CGAGCAGGGC TGCATCGCGG CGATTACCGA CACGATTATC TCGGATACCG GCGTGAGCCG GGCACACGCG GAGCTACTCG CGTCCGGCCT GGTCGGGGCG GCCGAGACGG CGGCGCAGTT CTGGCTGGCC AGAGGGCGGC AGGTGCCGAA GGGAGAGGCG GAGGCGTTGG TCGCCGCGCT CTCCTGGCGA GGCATCGCGA GCTTCCCCTT GCAGGGTGAG TCAGCCTGA
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Protein sequence | MTAVGNGTQT AGRPTRLPRS ARRRQLLAAA QEVFVAQGYH AAAMDDIAER AGVSKPVLYQ HFPGKMELYL ALLDTHCDML VATVQEAMRG TLDNKERVSA SVRAYFDFVD HESESFRLVF ESDLRNDPAV RQRVERVEQG CIAAITDTII SDTGVSRAHA ELLASGLVGA AETAAQFWLA RGRQVPKGEA EALVAALSWR GIASFPLQGE SA
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