| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0358 |
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| Symbol | |
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| ID | 5056796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 409482 |
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| End bp | 411062 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640472630 |
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| Product | uroporphyrinogen III synthase HEM4 |
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| Protein accession | YP_001157221 |
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| Protein GI | 145592924 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CCCGTAAGCC CGTAGGCCGC ATCGCGTTCG TCGGGGCCGG TCCCGGCGAT
CCGGGCCTGC TGACCCGCCG GGGATACGAC GCCCTGGTCA GTGCCGACCA GGTGGTATAT
GACCGGGGAG TCCCTGAGGC GCTGCTCGAT GTCGTCCGCG CCCAGGCGAA GCAGGAGGCC
CAGCTCACCC TGGCCGAGGG CGGATCGGGC GACGTGGCGA AGGTTCTGAT CTCGGCGGCC
CGCTCCGGGC TGAACGCGGT GCACCTGGTC GCCGGTGACC CGTTCGGCCA CGAGGCGGTG
GTCCGGGAGG TGCAGGCGGT CGCGCGGACC GCCGGACAGT TCGAGGTGGT ACCGGGCGTC
GGCCAGGCCG AGGGGGTGGC GACCTACGCG GGTGTGCCGC TGCCCGGTGT TCGTACGGCG
GCCGATGTCG AGGATGTCAC CACGCTCGAC TTCGAGGCAC TGGCCGCCGC AGTCGCCCGG
GGACCGCTGG CCCTCGCGGT GGAGGCCGGA GATCTCGCCG CGATCCGGGA CGGGTTGCTC
GCCGCCGGAG TTGACGATGC GACCGCGGTC GGCGTGACCG GCGACGGCAC CGGCGAGACC
CAGTACACGA CGACGTCGAC GGTGGACTCC TTCGTCGCGG CGGCGCTCGG GTTCACCGGC
CGGGTGGTGC TCACCCTCGG CGAGGGCGTC GGCCAGCGGG ACAAGCTCAG CTGGTGGGAG
AACCGTCCGC TGTACGGCTG GAAGGTGCTC GTCCCGCGGA CCAAGGAGCA GGCGGGGGTG
ATGAGCGCCC GACTGCGCGC GTACGGCGCG ATCCCCTGTG AGGTGCCGAC CATCGCGGTC
GAGCCGCCGC GTACCCCCGC GCAGATGGAG CGGGCGGTCA AGGGGCTGGT CGACGGCCGG
TACGCTTGGG TGATCTTCAC TTCGGTGAAT GCGGTCCGGG CGGTCTGGGA GAAGTTCGCC
GAGCATGGCC TCGACGCCCG CCACTTCGGC GGTGTCAAGA TCGCCTGCAT CGGCGACGCG
ACCGCGGACG CGGTCCGCGC CTTCGGGATC CGGCCGGAGC TGGTCCCCGC CGGGGAGCAG
TCCTCGGAGG GGCTGCTGGC CGAGTTCTCG CCGCACGACG AGGTGCTCGA CCCGGTCGGT
CGGGTGCTGC TGCCGCGCGC CGACATCGCC ACCGAGACGC TCGCCGCCGG GCTCACCGAG
CGCGGCTGGG AGGTCGACGA CGTGACCGCC TACCGGACGG TTCGGGCGGC ACCGCCGCCG
GCCGAGATCC GCGACGCGAT CAAGTCGGGT GGGTTCGACG CGGTGCTCTT CACCTCATCG
TCCACGGTCC GGAATCTGGT CGGCATCGCC GGGAAGCCAC ACGCGCGTAC CGTTGTTGCG
GTTATCGGGC CCAAGACGGC GGAGACCGCC ACCGAGTTCG GCCTTCGGGT TGACGTGCAG
CCACCGCACG CCTCGGTCCC CGACCTGGTG GAGGCGCTGG CCGGCTACGC CGTCGAGCTG
CGCGAGAAGC TCGCCGCGAT GCCGGCGAAG CAGCGGCGCG GCTCGAAGGT ACAGGGGCCG
ACCGCCCTCC GGTTCCGCTG A
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| Protein sequence | MTRTRKPVGR IAFVGAGPGD PGLLTRRGYD ALVSADQVVY DRGVPEALLD VVRAQAKQEA
QLTLAEGGSG DVAKVLISAA RSGLNAVHLV AGDPFGHEAV VREVQAVART AGQFEVVPGV
GQAEGVATYA GVPLPGVRTA ADVEDVTTLD FEALAAAVAR GPLALAVEAG DLAAIRDGLL
AAGVDDATAV GVTGDGTGET QYTTTSTVDS FVAAALGFTG RVVLTLGEGV GQRDKLSWWE
NRPLYGWKVL VPRTKEQAGV MSARLRAYGA IPCEVPTIAV EPPRTPAQME RAVKGLVDGR
YAWVIFTSVN AVRAVWEKFA EHGLDARHFG GVKIACIGDA TADAVRAFGI RPELVPAGEQ
SSEGLLAEFS PHDEVLDPVG RVLLPRADIA TETLAAGLTE RGWEVDDVTA YRTVRAAPPP
AEIRDAIKSG GFDAVLFTSS STVRNLVGIA GKPHARTVVA VIGPKTAETA TEFGLRVDVQ
PPHASVPDLV EALAGYAVEL REKLAAMPAK QRRGSKVQGP TALRFR
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