Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0355 |
Symbol | |
ID | 5056793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 406383 |
End bp | 407153 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472627 |
Product | redox-sensing transcriptional repressor Rex |
Protein accession | YP_001157218 |
Protein GI | 145592921 |
COG category | [R] General function prediction only |
COG ID | [COG2344] AT-rich DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCGC ACCGTCCGCC CGGCGAGCCC GAACGCCCTG TCGCCGTGCC GGCGTTGCCG GACCTGCCAG AGGCGACCGT CGCCCGACTT CCCGAGTATC TCCGTGCCCT GCACAACCTG GCCGAAAACG GTCACGAGAC GGTGTCCAGC GAGTGGTTGG CCACGGCCGC AGGAGTCAAC TCCGCCAAGC TCCGCAAGGA TCTGTCACAC CTCGGTTCCT ACGGCACCCG GGGTGTCGGT TACGACGTAG CCCTGTTGAT CGATCAGATC GAGTACGTGT TGGGGCTCAC CCAGCGGCGG TCGGTTGCCC TGGTTGGGGT GGGTAATCTC GGTCACGCCC TCGCTGGCTA TGACGGCTTC GCCACCCGTG GCTTCCGCAT CGCCGCGCTC TTCGACGCCG ACCCCGTTCG GGTCGGTGAG GAGATCAACG GTCTGGTCGT CCGGCACGTG GACGAGCTGT CCCGGGTCGC CATCGAGGAG TCGATCGCGA TCGGCGTGAT CGCCACCCCG GCCGCCGCCG CGCAGCGGGT CGCCGACCGG CTGGTCGCCG GCGGAGTAAC CAGCATCCTG AACTTCGCGC CCTGCGTGCT GACCGTGCCG GACGGGGTTG ACGTACGCAA GGTCGACCTC GCCGTCGAGC TGCAGATCCT GTCCTTCCAC GAGCACCGTA AGGCGTCCCT GACCGCACTC CCCGCCGCCG GCGCTGCCAC CCTCACCCCA TTGCCGGGTG ACCTCGCCGC CACCGACCCC CAGGAGGCGA TCGGCACGTG A
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Protein sequence | MSPHRPPGEP ERPVAVPALP DLPEATVARL PEYLRALHNL AENGHETVSS EWLATAAGVN SAKLRKDLSH LGSYGTRGVG YDVALLIDQI EYVLGLTQRR SVALVGVGNL GHALAGYDGF ATRGFRIAAL FDADPVRVGE EINGLVVRHV DELSRVAIEE SIAIGVIATP AAAAQRVADR LVAGGVTSIL NFAPCVLTVP DGVDVRKVDL AVELQILSFH EHRKASLTAL PAAGAATLTP LPGDLAATDP QEAIGT
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