Gene Strop_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0354 
Symbol 
ID5056792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp404587 
End bp405903 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content71% 
IMG OID640472626 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001157217 
Protein GI145592920 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTA CACGCGGGGC CGCCACCCCC GCTTCCAGCC CGCTGCGCAA CCTGCTCCGC 
CAACTCCTGC GCGACTCGGG CTACGTACTC TCCGGCCTAC TCCTCGCCGT GGTTGGCTTC
GTGGTGGCCG TCACCGGGTT CACCCTCAGC CTGAGCCTGC TGGTGACCAC GCTGGGCCTG
CCGGTCCTGG CCGGCACGTT CTACGCCGTC CGGGTGCTGG CCGACATCGA ACGGATCCGG
CTGCCCACCG TGCTGAACGT GCCGCGGATC CGCCCCGTCT ACCGGGGCCC CGATCCGGAT
GCCACCTTCT GGCGCCGGGT CCTGGCACCG GTACGCGATC CGCAGTCGTG GCTCGACCTG
CTCCACGCGT TCAGCAAGCT GCTGGTGGCG ATGCCGGTCT TCGTCATCCT GGTCTGCTGG
TGGGTGCTGG CGCTCGCCGG CATCTGCTAC GCGGCATATG ATCGCTACCT CCCGCACGGT
CCAGACAGCC CGCACCTCAG CGAACTCCTC GGGATGGGCG ACGGCGCCGG TGCCCGAATC
TTCCTGAACA CCGCCATCGG TGTCTTCGCC CTGCTCACCC TGCCGCTGGT AGCCCGCGCA
TGTGCGCGGA CCGAGGGTGG CCTGGCCCGC GCTCTCCTCA CCGGCGTGGC CGAGCTGCGC
AACCGGATCA CCACCCTCGA GGAGCAGAAG AGAGCAGCCG TCTCCGCCGA GGCGAATGCG
CTGCGCAAGC TCGAGCGAGA CATCCACGAC GGGCCACAGC AACGGCTGGT CCGACTCGCG
ATGGATCTCA GCCGGGCCCG CGAGCAGCTC ACCAGCAACC CGGTAGCGGC CCGGGACACG
CTCGACGAGG CAGTCGACCA AACCCGGGAG ACCCTGACCG AGCTGCGGGC GCTGTCCCGA
GGCATCGCAC CGCCCATCCT GGTTGACCGC GGACTGCCAA GCGCCCTCGC GGCGCTGGCC
GGGCGCGGGC TGATCCCGAT CGAGCTGCAG GTTGACGCCG GGCTCGGCGA GCCCGGCGGC
CGACTCGATC CAGCGGTAGA GAGCACGGCG TACTTCGTGG TCGCCGAGGC GCTCACCAAC
GTCGCCAAAC ACAGCCGAGC CACCGAGTGC CGAGTCACAG TGGAGCGGGC CGGGCAGCGG
CTGAGGGTCG GCGTCGACGA CGACGGCCAG GGCGGCGCGC ACCTGGCAAA GGGGCACGGG
CTAGTCGGCA TCGCGGACCG GGTCCGGGCA GCCGGCGGGC AACTCCTCGT GACCAGCCCC
GCCGGCGGCC CCACCGCGAT CCGCGCCGAG TTCCCCGTGA CGACCGGAAA GTGGTAG
 
Protein sequence
MTATRGAATP ASSPLRNLLR QLLRDSGYVL SGLLLAVVGF VVAVTGFTLS LSLLVTTLGL 
PVLAGTFYAV RVLADIERIR LPTVLNVPRI RPVYRGPDPD ATFWRRVLAP VRDPQSWLDL
LHAFSKLLVA MPVFVILVCW WVLALAGICY AAYDRYLPHG PDSPHLSELL GMGDGAGARI
FLNTAIGVFA LLTLPLVARA CARTEGGLAR ALLTGVAELR NRITTLEEQK RAAVSAEANA
LRKLERDIHD GPQQRLVRLA MDLSRAREQL TSNPVAARDT LDEAVDQTRE TLTELRALSR
GIAPPILVDR GLPSALAALA GRGLIPIELQ VDAGLGEPGG RLDPAVESTA YFVVAEALTN
VAKHSRATEC RVTVERAGQR LRVGVDDDGQ GGAHLAKGHG LVGIADRVRA AGGQLLVTSP
AGGPTAIRAE FPVTTGKW