Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0354 |
Symbol | |
ID | 5056792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 404587 |
End bp | 405903 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640472626 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001157217 |
Protein GI | 145592920 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTA CACGCGGGGC CGCCACCCCC GCTTCCAGCC CGCTGCGCAA CCTGCTCCGC CAACTCCTGC GCGACTCGGG CTACGTACTC TCCGGCCTAC TCCTCGCCGT GGTTGGCTTC GTGGTGGCCG TCACCGGGTT CACCCTCAGC CTGAGCCTGC TGGTGACCAC GCTGGGCCTG CCGGTCCTGG CCGGCACGTT CTACGCCGTC CGGGTGCTGG CCGACATCGA ACGGATCCGG CTGCCCACCG TGCTGAACGT GCCGCGGATC CGCCCCGTCT ACCGGGGCCC CGATCCGGAT GCCACCTTCT GGCGCCGGGT CCTGGCACCG GTACGCGATC CGCAGTCGTG GCTCGACCTG CTCCACGCGT TCAGCAAGCT GCTGGTGGCG ATGCCGGTCT TCGTCATCCT GGTCTGCTGG TGGGTGCTGG CGCTCGCCGG CATCTGCTAC GCGGCATATG ATCGCTACCT CCCGCACGGT CCAGACAGCC CGCACCTCAG CGAACTCCTC GGGATGGGCG ACGGCGCCGG TGCCCGAATC TTCCTGAACA CCGCCATCGG TGTCTTCGCC CTGCTCACCC TGCCGCTGGT AGCCCGCGCA TGTGCGCGGA CCGAGGGTGG CCTGGCCCGC GCTCTCCTCA CCGGCGTGGC CGAGCTGCGC AACCGGATCA CCACCCTCGA GGAGCAGAAG AGAGCAGCCG TCTCCGCCGA GGCGAATGCG CTGCGCAAGC TCGAGCGAGA CATCCACGAC GGGCCACAGC AACGGCTGGT CCGACTCGCG ATGGATCTCA GCCGGGCCCG CGAGCAGCTC ACCAGCAACC CGGTAGCGGC CCGGGACACG CTCGACGAGG CAGTCGACCA AACCCGGGAG ACCCTGACCG AGCTGCGGGC GCTGTCCCGA GGCATCGCAC CGCCCATCCT GGTTGACCGC GGACTGCCAA GCGCCCTCGC GGCGCTGGCC GGGCGCGGGC TGATCCCGAT CGAGCTGCAG GTTGACGCCG GGCTCGGCGA GCCCGGCGGC CGACTCGATC CAGCGGTAGA GAGCACGGCG TACTTCGTGG TCGCCGAGGC GCTCACCAAC GTCGCCAAAC ACAGCCGAGC CACCGAGTGC CGAGTCACAG TGGAGCGGGC CGGGCAGCGG CTGAGGGTCG GCGTCGACGA CGACGGCCAG GGCGGCGCGC ACCTGGCAAA GGGGCACGGG CTAGTCGGCA TCGCGGACCG GGTCCGGGCA GCCGGCGGGC AACTCCTCGT GACCAGCCCC GCCGGCGGCC CCACCGCGAT CCGCGCCGAG TTCCCCGTGA CGACCGGAAA GTGGTAG
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Protein sequence | MTATRGAATP ASSPLRNLLR QLLRDSGYVL SGLLLAVVGF VVAVTGFTLS LSLLVTTLGL PVLAGTFYAV RVLADIERIR LPTVLNVPRI RPVYRGPDPD ATFWRRVLAP VRDPQSWLDL LHAFSKLLVA MPVFVILVCW WVLALAGICY AAYDRYLPHG PDSPHLSELL GMGDGAGARI FLNTAIGVFA LLTLPLVARA CARTEGGLAR ALLTGVAELR NRITTLEEQK RAAVSAEANA LRKLERDIHD GPQQRLVRLA MDLSRAREQL TSNPVAARDT LDEAVDQTRE TLTELRALSR GIAPPILVDR GLPSALAALA GRGLIPIELQ VDAGLGEPGG RLDPAVESTA YFVVAEALTN VAKHSRATEC RVTVERAGQR LRVGVDDDGQ GGAHLAKGHG LVGIADRVRA AGGQLLVTSP AGGPTAIRAE FPVTTGKW
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