| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0339 |
|---|
| Symbol | |
|---|
| ID | 5056777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 391240 |
|---|
| End bp | 392184 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640472611 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_001157202 |
|---|
| Protein GI | 145592905 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTGG GCGTCCTTGA TGTGGGTTCC AATACGGTGC ACCTGCTGGT GGTGGACGCT
CACCGGGGCG CGCACCCCTG GCCGGCGCAC TCCGAGAAGG CGGTGCTGCG ACTGGCCGAA
CAGATCGGCC CGGATGGCGC GCTCACCCCC GCCGGCGCGG ATTCCCTGGT GCGGGCGGTC
GCGTCCGCGA AGGAGTCCGC GTTCGGGCTG GGCACCGACA ACCTGATCGC GTTCGCCACC
TCCGCAGTAC GGGACGCCAC CAACTCGGTG GCGGTGTTGG CCCGGGTCCA GGCGGAGACC
GGGGTCAGAC TGGAGGTCCT CACCGGTGCC GACGAGGCCC GGATGACCTT CCTCGCGGTG
CGCCGCTGGT TCGGCTGGTC GGCCGGGCGG CTGCTGGTGC TCGACATCGG TGGAGGCTCG
CTGGAGATCG CGGCGGGCAT CGACGAGGAT CCGGACGCCG CGGTGTCGTT GCCGCTGGGC
GCTGGCCGGC TCACCCGCCA CCATCTCCAG GTCGCCGCGG GCAGTACGTC CCCGCCGGGG
GCCGAGCAGG TGGAGAAGCT GCGGGCGTAC GTGGACGGCC AGCTTGACGC GGTGGCCGGG
GGGCTGAACA AGGTGGGCTG GGAGCGTCCG GTCGCCACCT CGAAGACCTT CCGGACCCTG
GCCCGCCTCG CCGGGGCGGC CCCCTCCGGG GCGGGCGTCT GGGCCCGACG CCGGCTTACC
CGGGCCGGAC TGCGGCAGGT GCTCGGGTTC ATCCGGCACA TTCCCCCGGC GCAGCTCGTC
GAGCTGGACG GGGTCAGCGT CGGTCGGGCG CATCAGCTGT TGGCCGGTGC GGTGGTCGCC
GAGGCGGCGA TGCGCCGGCT GGACATCGGC ACCCTGGAGG TCTGCCCGTG GGCGTTGCGG
GAGGGGGTGA TCCTGCGCCG GCTTGATCAG CTCGTGTCGA TGTAA
|
|---|
| Protein sequence | MRLGVLDVGS NTVHLLVVDA HRGAHPWPAH SEKAVLRLAE QIGPDGALTP AGADSLVRAV
ASAKESAFGL GTDNLIAFAT SAVRDATNSV AVLARVQAET GVRLEVLTGA DEARMTFLAV
RRWFGWSAGR LLVLDIGGGS LEIAAGIDED PDAAVSLPLG AGRLTRHHLQ VAAGSTSPPG
AEQVEKLRAY VDGQLDAVAG GLNKVGWERP VATSKTFRTL ARLAGAAPSG AGVWARRRLT
RAGLRQVLGF IRHIPPAQLV ELDGVSVGRA HQLLAGAVVA EAAMRRLDIG TLEVCPWALR
EGVILRRLDQ LVSM
|
|---|
| |