Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0336 |
Symbol | |
ID | 5056774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 388340 |
End bp | 389572 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640472608 |
Product | histidine kinase |
Protein accession | YP_001157199 |
Protein GI | 145592902 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTGG CCTGGCTCGT CCTGACGCGG CGAGCTGGAT CGACCTTGAT GGGGAGCCAC CAGTCCGGCT CCCCCCGGCC CAGGGGGAGG CCCGCGATAG CCGACGGTCC GCAGTCCGGC CTTGGTCGCC GGACGATCGA CTCCCTCCGG GTCGGCGTCG TGGTCCTCGC CGACGACGAC GGGCCCGTCC TGGTCAACCC GGCAGCCCGC GCGATGGGGC TGCTCCGCGC TGGCGGCGCA CCGGGTACGG TCACCGCCCA TCCGTTGATC CGGACGCTCG CGGGGCAGGT GCGGCGGACC GGCGTACGTC GAGAGATCCA GCTGGACCTG CCCCGGGGGG ACGACAGCGT CGCCGCGGAG AATCCGCTCG GCGTGCATCT GCGGGCGGTT GGTCTCGGCG GCGGCCATGT CGCCGTGGAA GCCGTGGATG TGACCGAGTC GCACCGGCTG GCCCGGGTCC GGCGAGACTT CGTGGCCAAC GTGAGTCACG AGCTGAAGAC CCCCATCGGG GCGCTCCAAC TCCTCGCCGA AGCGTTGCTG GACGCGACCG AGCCGGCCGA CGAGGAGCAG CCGGACCTCT CCGAGGACCT GGTCGCCACT CGACGGTTCG CCGAACGGAT CCGGCACGAG TCGACCCGGC TGGGTCGGTT GGTGCAGGAG TTGCTGGAGC TGACCCGGCT TCAGGGCGCC GACCCGCAGC CCGCGCCGGA GCCGGTCGCC GTGGACTGGG TGGTCGGCGA GGTGGTGGAT CGGACCCGGA CCGGTGCCAG CGCCCGCCGG ATCGACGTGG TGGTTGACGG CGAGCGGGGA CTGACCGTGT ACGGCAGTGA CACCCAGTTG GCCACCGCCG TGTCGAACCT GGTCGAGAAT GCCATCAACT ACTCGGGTGA GGACACCACC GTCCGGATCA CCGCCCGGCA CGACGATGAA CACGTCACGA TCGCCGTTAC CGACCAGGGC ATCGGGATCG GCCCGCGCGA AGTGGACCGG ATCTTCGAGC GTTTCTACCG GGCCGACCAG GCGCGATCCC GCGCGACCGG CGGCACCGGT CTCGGGCTCG CCATCGTCAA GCACATCGCC AGCAACCACG GCGGACGGGT GGAGGTCGCG AGTACTCCTG ACGAGGGCTC GACGTTCACC CTCCGACTCC CCGCCCGCGC CCCGGACGAC CCTTTGGTGA TACCGCCCTC GGCTGAGATC GAGGCCGAAC CGGCCGAGTC CCAGCAGACG TGA
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Protein sequence | MLLAWLVLTR RAGSTLMGSH QSGSPRPRGR PAIADGPQSG LGRRTIDSLR VGVVVLADDD GPVLVNPAAR AMGLLRAGGA PGTVTAHPLI RTLAGQVRRT GVRREIQLDL PRGDDSVAAE NPLGVHLRAV GLGGGHVAVE AVDVTESHRL ARVRRDFVAN VSHELKTPIG ALQLLAEALL DATEPADEEQ PDLSEDLVAT RRFAERIRHE STRLGRLVQE LLELTRLQGA DPQPAPEPVA VDWVVGEVVD RTRTGASARR IDVVVDGERG LTVYGSDTQL ATAVSNLVEN AINYSGEDTT VRITARHDDE HVTIAVTDQG IGIGPREVDR IFERFYRADQ ARSRATGGTG LGLAIVKHIA SNHGGRVEVA STPDEGSTFT LRLPARAPDD PLVIPPSAEI EAEPAESQQT
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