Gene Strop_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0336 
Symbol 
ID5056774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp388340 
End bp389572 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content71% 
IMG OID640472608 
Producthistidine kinase 
Protein accessionYP_001157199 
Protein GI145592902 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTGG CCTGGCTCGT CCTGACGCGG CGAGCTGGAT CGACCTTGAT GGGGAGCCAC 
CAGTCCGGCT CCCCCCGGCC CAGGGGGAGG CCCGCGATAG CCGACGGTCC GCAGTCCGGC
CTTGGTCGCC GGACGATCGA CTCCCTCCGG GTCGGCGTCG TGGTCCTCGC CGACGACGAC
GGGCCCGTCC TGGTCAACCC GGCAGCCCGC GCGATGGGGC TGCTCCGCGC TGGCGGCGCA
CCGGGTACGG TCACCGCCCA TCCGTTGATC CGGACGCTCG CGGGGCAGGT GCGGCGGACC
GGCGTACGTC GAGAGATCCA GCTGGACCTG CCCCGGGGGG ACGACAGCGT CGCCGCGGAG
AATCCGCTCG GCGTGCATCT GCGGGCGGTT GGTCTCGGCG GCGGCCATGT CGCCGTGGAA
GCCGTGGATG TGACCGAGTC GCACCGGCTG GCCCGGGTCC GGCGAGACTT CGTGGCCAAC
GTGAGTCACG AGCTGAAGAC CCCCATCGGG GCGCTCCAAC TCCTCGCCGA AGCGTTGCTG
GACGCGACCG AGCCGGCCGA CGAGGAGCAG CCGGACCTCT CCGAGGACCT GGTCGCCACT
CGACGGTTCG CCGAACGGAT CCGGCACGAG TCGACCCGGC TGGGTCGGTT GGTGCAGGAG
TTGCTGGAGC TGACCCGGCT TCAGGGCGCC GACCCGCAGC CCGCGCCGGA GCCGGTCGCC
GTGGACTGGG TGGTCGGCGA GGTGGTGGAT CGGACCCGGA CCGGTGCCAG CGCCCGCCGG
ATCGACGTGG TGGTTGACGG CGAGCGGGGA CTGACCGTGT ACGGCAGTGA CACCCAGTTG
GCCACCGCCG TGTCGAACCT GGTCGAGAAT GCCATCAACT ACTCGGGTGA GGACACCACC
GTCCGGATCA CCGCCCGGCA CGACGATGAA CACGTCACGA TCGCCGTTAC CGACCAGGGC
ATCGGGATCG GCCCGCGCGA AGTGGACCGG ATCTTCGAGC GTTTCTACCG GGCCGACCAG
GCGCGATCCC GCGCGACCGG CGGCACCGGT CTCGGGCTCG CCATCGTCAA GCACATCGCC
AGCAACCACG GCGGACGGGT GGAGGTCGCG AGTACTCCTG ACGAGGGCTC GACGTTCACC
CTCCGACTCC CCGCCCGCGC CCCGGACGAC CCTTTGGTGA TACCGCCCTC GGCTGAGATC
GAGGCCGAAC CGGCCGAGTC CCAGCAGACG TGA
 
Protein sequence
MLLAWLVLTR RAGSTLMGSH QSGSPRPRGR PAIADGPQSG LGRRTIDSLR VGVVVLADDD 
GPVLVNPAAR AMGLLRAGGA PGTVTAHPLI RTLAGQVRRT GVRREIQLDL PRGDDSVAAE
NPLGVHLRAV GLGGGHVAVE AVDVTESHRL ARVRRDFVAN VSHELKTPIG ALQLLAEALL
DATEPADEEQ PDLSEDLVAT RRFAERIRHE STRLGRLVQE LLELTRLQGA DPQPAPEPVA
VDWVVGEVVD RTRTGASARR IDVVVDGERG LTVYGSDTQL ATAVSNLVEN AINYSGEDTT
VRITARHDDE HVTIAVTDQG IGIGPREVDR IFERFYRADQ ARSRATGGTG LGLAIVKHIA
SNHGGRVEVA STPDEGSTFT LRLPARAPDD PLVIPPSAEI EAEPAESQQT