Gene Strop_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0305 
Symbol 
ID5056743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp355558 
End bp359913 
Gene Length4356 bp 
Protein Length1451 aa 
Translation table11 
GC content71% 
IMG OID640472577 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001157168 
Protein GI145592871 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGTAC GACCATCCGC GCGGTCACGC CTGGGGCGTC TGGCCGTCGC GTTCGGGGCG 
CTGGCGCTGG GGTTGAGCGC CCAGCCCGCG CTCGCCGCGT CGCCGCCCGG CGCATCGGAA
CGGGCAACTG TCGCGCCCGA GCTGCTGGAC AGCAGCGACA GCACCAGCTT CATGGTCTAC
CTGCGGGAAA CCGCACCGCT CGCCAGCACC GCGAACCTAC CGGCGCCCGA TGACCGGGCC
CGCGCAGTCC ACCAACTCCT GACGAACACG GCCGACCGCA CCCAACGAGG CCTGCGGCAG
CTGCTCGACG CAGAGAGGGC GGAGCACACT CCGTACTGGA TCGCCAACGC CATCCAGGTC
CACGGAGACC GGGCCCTGAT CGACGAGATC GCGAGCCGAC CCGAGGTCGA GCGGATCGAG
CCGATCCGCA GTCGCCCGCT GATCGAGCCG ACGCCAGCCG AGGCCGAGGC CCGTATCGAC
GCCGTCGAGT GGGGCATCGC CGAGATCGGC GCCCCCCAGG TGTGGGACGA GTTCGGCGAC
CGCGGCGAAG GCATCGTGGT AGCCAACATC GATACCGGCG TGCAGCACGA CCACCCCGCC
CTCGTCAGCG CCTACCGGGG CAACCTCGGC GGCGGCAGCT TCGACCACGC CTACAACTGG
TTCGACCCGA CGGGCATCTG CTCCGACTCG GAGCCCTGCG ACAACAACGA CCACGGCACG
CACACGATGG GCACGATCGT CGGCGACGAC GGGGGCGACA ACCAGATCGG CGTCGCACCG
GGTGCCCGGT GGATAGCGGC GAAGGGCTGC GAGTTCACCA CCTGCTCGGA CCCCTCGCTG
CTCGGCGCCG GCCAGTGGAT CCTGGCCCCG ACCGACGTGA ACGGGGAGAA CCCCCGCCCT
GACCTGCGCC CCGACATCGT CAACAACTCG TGGGGCGGCG GCGGCGGTGA CCCCTGGTAC
CAGCAGACCG TCGATGCCTG GCGCGCCGCC GGGATCCTTC CGGTCTTCTC CAACGGCAAC
AGCGGCCCGA GCTGCGGCAC CGCCGGCTCC CCGGGGGACT ACCCGAACTC GTACGCCGTC
GGGGCGTACG GGTCGAACGG CGCCATCGCC GGCTTCTCCA GCCGTGGCTC CGGCAACGAG
CTGATCAAGC CGAACATCGC CGCACCTGGG GTGGCGGTGC GATCCAGCGT CCCCGGCGGC
GGGTATGCCG CGTTCAACGG CACCTCGATG GCGGCCCCAC ACGTCGCCGG CACGGCAGCG
CTGATCTGGT CGATCGCGCC CAGCCTCCGC GGGGACCTAC CGGCCACCGA GGCGCTGCTG
GACCGCACCG CCCGCGACGT TGACGACACC ACCTGCGGCG GGACCGCGGA GGACAACAAC
GTCTTCGGCG AAGGGCGGCT CGACGCGTAC GCGGCGGTCA ACGAGGCCCC GCGCGGCCCG
GTCGGCCGAA TCTCCGGCAC GGTTACCTCG ACCGACGGCG GCGACCCGAT CGTCGGGGCG
ACCATCGACG ACGGCACCCG CAGCGTCACC ACCGGCACCG ACGGCCGGTA CGCGCTGACC
GTACCGGCTG GCGAGACCAC GGTGGAGGTC ACCGCGTACG GCTACGAGTC GCAGTCGGAC
ACCCTCACCG TGGACGAGGG CGGGGCGGTG ACCCGAGACT TCGCGCTCGT CGCCAGCCCG
GTGGTCACGG TTGGCGGTCA GGTCACCGAC GACTCCGGGC ACGGCTGGCC GCTGTACGCC
CAGGTCGACA TCGCCGGCAG GCCGGGCGAG CCGGTCTTCA CCGACCCGGT GACCGGAGAG
TGGTCGGCCA CCGTGGCCGG CGACAACACC TACTCGATCA CCGCCACTCC GCAGTACCCG
GGCTACCACA CGGTGACTCG TGAGGTACCG GTCGACGGCG ACGACGCCAC CGTCGACATG
GCCATTCCGG TCGAGGCATC CTGCACGGCG GCCGGCTACA CCGCCGCCTA CGGTGACCCC
CTGCTGACCG AGGACTTCTC CGGCACCACC GCACCGGAAG GCTGGTCGGT GGTCAACCGC
ACCGAAGAGG GCGGTTGGGT CTTCGAGGAC CTCGGCCAAC GGGGCAACCT GACCGGCGGC
AGCGGCGGGT TCGCGATCAT CGACAGCGAC GAACTCGGCC CCGGCAACAG CCAGGACACC
GACCTGGTGA GCCCGTCGGT GGACTTCTCC GAGACCGCCG CACCGGTGCT GCGATTCCGC
AGTGACTGGC GGGCACTCGG CACCAGCGAC AGTGCCGACA TCGACGTCTC CACCGACGGG
GGCGAGACCT GGACCAACGT CTGGCACCAG ACCGACAGCC TGCGTGGGCC GCGGGTCGAG
GAGGTGCCCT TGACGGGGGC GGGCGGCGCG CCGGAGGCCC AGGTACGGTT CCGCTTCGCT
GGCTCCTTCG CCTGGTGGTG GCAGGTTGAC GACGTCGCCC TGCTCAACCG GTCGTGCAAC
CCGGCACCCG GTGGCCTGCT GGTCGGCACG ACCAGCGACC AGAACACCGG CGACCCGCTC
AACGGCGTCA CCGTGACCAG TGTGGGTCAG CCCGAAGACC AGGCGGTCTC GGCCGGTACG
CCGGACGACC CAGCGGAGTC GGACGGCTTC TACTGGCTCT TCTCCAGCCT CACCGGCACC
CACCCGTTCA CCGCGACGCG GACGCCGTAC CCACCGGCCA CCGAGGACGT GACGATCGTC
GCCGACGAGG TACGCCGGGC CGACATCGCG CTCGCCGCCG GCGAGCTCAC GGTCAGCCCG
ACCGAGGTGG AGTCACACCA GCCGTACGGC AGCACCCGGA GCACCCGGGT GACGGTGAAG
AACACCGGCA CCGCCCCGGC CACCGTCGAG GTGTTGGAGC GGGGCGGCCA GTTCGAGCTG
TTGGGCCAGC CCGGCGCCCC GCTGCGCGAG GTCACGGTGA AGGGCATCAG TACGGCGCAA
ACCGGGACCA CGTACGGTGA CGCGCCAGCG GACGCCGGCC CGTCGGCGGA CGACTCCTGG
ACCCGAGTCG CGGACCTGCC GACGGCGGTC TTCGACAACA CCGCCACCTC GCTGGACGGA
AAGGTGTACT CGATCGGCGG CGGCACCGGC TCCGGAACGG AGACCAAGGC CTGGGTCTAT
GACCCGGACG CCGACTCCTG GACCGAGTTG CCCGAGCTAC CCAGTGCCCG GGCGAAGCCG
GGCGTCGCGG CGATCGGCGG CAAGATCTAC GTGACCGGCG GGTGGGGCGC GGACGGCAAC
CCCGTCGCCA CCGTGGACGT CTACGACCCG ACCAGCGAGA CCTGGAGCAC CCTGGACGGA
GTGACCAGCC CCGCGCCGGC CGCCGCCGCC GGGACCGCCG TCGCCGGAGG CAAGATCTAC
CTGGTCGGCG GCTGCGCCGA CTCAGCCTGT ACCGCGACCG ACGAGACGGT GGTGTTCGAC
CCGCAGGCCG GGGCCTTCAC CACCGCCGCG TCCTACCCGT ACCCGGTCTC CTGGATGAGC
TGCGGTGGCA TCGGGGCCAA GGTGTACTGC GCCGGCGGCT CGGGGGGCAG CACCTACGGC
TACCAGTACG ACCCGGCAAC CGACACCTGG GATCCGATCC CGGACATGCC GCTGGATCTG
TGGGGCTCGG CGCACACCAC GGCGGGCGGG ATGCTCGTGC TGGCGGGCGG CGTCACCGAT
AACTCCAACT CGCTGACCAA CGAGACGGTC GGCTACGACC CGGCGTCCGG AAGCTGGCAG
GACCTGCCGA ACGTCGAGTT CACCCGGTAC CGGGGGGCCG CGGCGTGTGG GGCCTACCGG
CTCGGCGGCT CACCCGCCCC GTTCGTCGGG TCGGCGGAGA GCGAGCGGCT CGGCGGGCTG
GAGTCGTGCG GCGATGCGGC GGAGCTTCCG TGGCTGAGCA CCTCGCCATC CAGCTTCACG
TTGGAGCCGG GCGAGTCCCG CAAGGTGAAG GTGACTCTCA CGGCCACCGC TGAGGCCGGG
GTCGACCAGC CCGGGCAGTA CACCGGCGAA CTGACGTTCG CGGCCGACGT GCCGTCCTCG
GTCCCGCCGG TCACGGTGGA GATGAACGTG TCCCCGCCGA GCAACTGGGG CAAGCTCCAG
GGCACGGTTA CCGGAGTGAC CTGTGGTGGG GAGACGGTCG GCGTACCAGC CACGGTACGG
GTGAACGCGG CCGGCAGCGG CGCCGGCTAC ACCCTGACGG CGGACGCCTC CGGCGCGTAC
GTGTGGTGGC TGCCCAAGGG CCGCTACGAC GTGATCGTCG CCAAGGACGG TTGGGTGCCA
GAGATTGACC GCACCCGGGT CAAGGCAGGG TTCGTCGGGA CCCTCGACTT CAGCCTGGAA
CCCTCGTCGG ACTGCACGAG AGCAAGCGGC ATCTGA
 
Protein sequence
MFVRPSARSR LGRLAVAFGA LALGLSAQPA LAASPPGASE RATVAPELLD SSDSTSFMVY 
LRETAPLAST ANLPAPDDRA RAVHQLLTNT ADRTQRGLRQ LLDAERAEHT PYWIANAIQV
HGDRALIDEI ASRPEVERIE PIRSRPLIEP TPAEAEARID AVEWGIAEIG APQVWDEFGD
RGEGIVVANI DTGVQHDHPA LVSAYRGNLG GGSFDHAYNW FDPTGICSDS EPCDNNDHGT
HTMGTIVGDD GGDNQIGVAP GARWIAAKGC EFTTCSDPSL LGAGQWILAP TDVNGENPRP
DLRPDIVNNS WGGGGGDPWY QQTVDAWRAA GILPVFSNGN SGPSCGTAGS PGDYPNSYAV
GAYGSNGAIA GFSSRGSGNE LIKPNIAAPG VAVRSSVPGG GYAAFNGTSM AAPHVAGTAA
LIWSIAPSLR GDLPATEALL DRTARDVDDT TCGGTAEDNN VFGEGRLDAY AAVNEAPRGP
VGRISGTVTS TDGGDPIVGA TIDDGTRSVT TGTDGRYALT VPAGETTVEV TAYGYESQSD
TLTVDEGGAV TRDFALVASP VVTVGGQVTD DSGHGWPLYA QVDIAGRPGE PVFTDPVTGE
WSATVAGDNT YSITATPQYP GYHTVTREVP VDGDDATVDM AIPVEASCTA AGYTAAYGDP
LLTEDFSGTT APEGWSVVNR TEEGGWVFED LGQRGNLTGG SGGFAIIDSD ELGPGNSQDT
DLVSPSVDFS ETAAPVLRFR SDWRALGTSD SADIDVSTDG GETWTNVWHQ TDSLRGPRVE
EVPLTGAGGA PEAQVRFRFA GSFAWWWQVD DVALLNRSCN PAPGGLLVGT TSDQNTGDPL
NGVTVTSVGQ PEDQAVSAGT PDDPAESDGF YWLFSSLTGT HPFTATRTPY PPATEDVTIV
ADEVRRADIA LAAGELTVSP TEVESHQPYG STRSTRVTVK NTGTAPATVE VLERGGQFEL
LGQPGAPLRE VTVKGISTAQ TGTTYGDAPA DAGPSADDSW TRVADLPTAV FDNTATSLDG
KVYSIGGGTG SGTETKAWVY DPDADSWTEL PELPSARAKP GVAAIGGKIY VTGGWGADGN
PVATVDVYDP TSETWSTLDG VTSPAPAAAA GTAVAGGKIY LVGGCADSAC TATDETVVFD
PQAGAFTTAA SYPYPVSWMS CGGIGAKVYC AGGSGGSTYG YQYDPATDTW DPIPDMPLDL
WGSAHTTAGG MLVLAGGVTD NSNSLTNETV GYDPASGSWQ DLPNVEFTRY RGAAACGAYR
LGGSPAPFVG SAESERLGGL ESCGDAAELP WLSTSPSSFT LEPGESRKVK VTLTATAEAG
VDQPGQYTGE LTFAADVPSS VPPVTVEMNV SPPSNWGKLQ GTVTGVTCGG ETVGVPATVR
VNAAGSGAGY TLTADASGAY VWWLPKGRYD VIVAKDGWVP EIDRTRVKAG FVGTLDFSLE
PSSDCTRASG I