Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0301 |
Symbol | |
ID | 5056739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 341384 |
End bp | 342175 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640472573 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_001157164 |
Protein GI | 145592867 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACTG ACTCCTTCCG CCGCCAACTT GTGCTCGCGC TCGGTCGGTC CACCCCCGCT TTTCACTCAC CACGAGCAGC CCGACCTGGC CGTTTAAGAC ACCTCATTGA TGCCCTGAGC CGACGTACCC CAGCCTTCGC CAGCCAACAG ACCGTAGATC TGTCCAGCGC TGATCTCCAC CAGGACGACT CTCGCACCGC CGACCTCCGC AAGTCCGACC TGGCTGGCGT CGAGCTCAAC AACAGGGATC TTCGCGAGAC TGATCTCGCC GGTGTCAACC TCGCCCGCGC TAATTTCGCT GGCGTTGACC TCACCGGTGC GAACCTTGCC GGTGTCGACC TCCGCGGCGC GGACCTCACC GACGTCGACC TCACAGGCGC GAACCTTGCC GGTGTCGACC TCCGCGGCGC GGACCTCACC GACGTCAACC TCACTGGCGC GCTGCTCATC GGTGCCGACC TCACCGGTGT TGACCTTGCC GGCGTCAACC TGGCCGGTGT TGACCTTCGC GGAGTCAATC TCACCGGCGT CGACCTCACC AGCGCCGATC TTCGTGAGGC CAACCTCGAT CGCGCCAACC TCACCGGCGT CAACCTCCGC GAGGCCAACC TCTACGGTGC CGTTCTCACC AGCACCACAC TCGCGGGGGC ACGGTGGGAT TGGGCCACTA TCTGGCCACC CGACCGGGCA GCGGAGATCT GGTTCCGGTC GGCGGAATGG CCGGATCAAC CGGGCGTTTA CGTCGTGCTA CCAGACGCTG GCGGCCGGAT TCGCCCATCC GTTGTCGTGT GA
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Protein sequence | MSTDSFRRQL VLALGRSTPA FHSPRAARPG RLRHLIDALS RRTPAFASQQ TVDLSSADLH QDDSRTADLR KSDLAGVELN NRDLRETDLA GVNLARANFA GVDLTGANLA GVDLRGADLT DVDLTGANLA GVDLRGADLT DVNLTGALLI GADLTGVDLA GVNLAGVDLR GVNLTGVDLT SADLREANLD RANLTGVNLR EANLYGAVLT STTLAGARWD WATIWPPDRA AEIWFRSAEW PDQPGVYVVL PDAGGRIRPS VVV
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