Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0285 |
Symbol | |
ID | 5056723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 327477 |
End bp | 328121 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472557 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_001157148 |
Protein GI | 145592851 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.376291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.13988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCGGA GCGGCTACGA CGAGCAGCTT GATCGGTTGA CTGGCGCCCT GGCCGTGATG AGCCGGGAGG CCGCGGCGGC GATCCGGGGT GCGGGCACCG CGCTTCTGGA CGTGAACCGG GAGGCGGCCG AGCAGGTCGT TCGGAACGAC GCCGTCCTTG ATCAGCTTCG CTGGGATATC GAGGCGGCCG TTCCGGAGCT GCTCGCTCGG CAGCAGCCGG TCGCCTCGGA CCTGCGCCTG GTGCTCTGCG CCATCCGGAT CGCGGCCGAC CTCGAGCGGA TGGGTGACCT CGCCGTGCAC ATCGCCAAGG TCGTGCAGAT GCGGTACCCG GTCATGGTCG TGCCTCCGCC GGCGGCGGTC GTGGTGACGG AGATGGCCGA AGCGGCTGCG CGGATCGCGG AGAAGGCCTC GACCGTGCTC ACCACCCGTG ATCCGCTGAC CGCCATGCAG ATCGGGCTCG ACGACGACGA GGTCGACACC GCCCAGTCGC GCCTGCTGTC GCTCCTTCTG GCCAGCTGGC AGTACGGGGT GGAGAGCGCC ATCGACCTCG CCCTGGTCGG CCGCTATTAC GAGCGGTACG CGGACCACGC GGTCAACGTG GCGCGTCAGG TGGTCTACCT GGTAACCGGA ACGATTCGGC TCTAG
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Protein sequence | MVRSGYDEQL DRLTGALAVM SREAAAAIRG AGTALLDVNR EAAEQVVRND AVLDQLRWDI EAAVPELLAR QQPVASDLRL VLCAIRIAAD LERMGDLAVH IAKVVQMRYP VMVVPPPAAV VVTEMAEAAA RIAEKASTVL TTRDPLTAMQ IGLDDDEVDT AQSRLLSLLL ASWQYGVESA IDLALVGRYY ERYADHAVNV ARQVVYLVTG TIRL
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