| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0279 |
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| Symbol | |
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| ID | 5056717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 320315 |
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| End bp | 321586 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640472551 |
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| Product | hypothetical protein |
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| Protein accession | YP_001157142 |
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| Protein GI | 145592845 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0267805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAAC GGCTTCGTCA CGCGTACCAG TCGGTGCGGT CCCGGCGGAG ATCGGCGGGC
CTACGCGCCG GGACGCCCGC TACCGCCTCG CCAGCTTCGC CCAGGCCGGC ACCAGCCCCG
CCGCCACCTC CGGCGGTCGG CACGAAGACA TCCGCACCGC TGCACAGCTC GACGACCAGC
CGGGACGACG CGGACGTGCC GCACGCGCTC CGTGTCGGGG CGGCGTGGTC CTGGCGGCTG
CTCGCGATCG GGATCGTCGC CTGGGCCTTG TTGCGGGTGA TGGGTCAGGT CCGGATCGTG
ATCATCCCGC TGGCCATCGC GCTGTTGCTG TCGGCACTGC TGGCCCCAGC CGTTGGCTGG
CTGCTCCGGG CCCGGTTCCC GCGGTCGCTG GCGACCGCCG TGGTGCTGGT GGGCGGGTTG
GCCGCAGTGA TCGGCACGCT GACCCTGGTG GTCAACGAGT TCATCCAGGG TTTGCCGGTG
CTGGGCGAGA AGTCGTCCCA GGGCGTACGC CAGATCCAGA ACTGGCTGAG ATCCGGCCCG
CTGCGCCTCG AGGACGAGCA GCTGGACAGG TACATCAACG ATGTCGAAGG GTGGCTCAAC
GAGAACATCG ATGGGCTGAC CAGCGGGGCG CTCTCCACCG CGGCCACCGT GGCCGAGGTG
TTGACGGGCA CGATCCTGGT GCTTTTCGCG ACCTTCTTCT TCCTTCGTGA CGGCAACCGG
ATCTGGCGCT TCCTGGTCCG GCTGATGCCG GTCAACGCCC GTTGGAAGGT CGACGACGCC
GGTCGGGCGT CCTGGCAGAC GCTCGGCGCG TACGTTCGGG CCACCGTGCT GGTGGCCTGC
ATCGACGCGC TCGGCATCGG CATCTTCCTG GTGATCTTCG AAATCCCGTT CGCGCTTCCG
CTCGCCGCGC TGGTCTTCCT CGCCTCGTTC ATCCCGATCA TCGGGGCGAC CTTGTCCGGC
GGGGTCGCGG TGCTCGTTGC CCTGGTGGAC AGCGGACCGA TCACCGCGTT GATCATCCTG
GGCGTGGTAA TCGGTGTGCA GCAGCTTGAG GGCCACGTGC TCCAGCCATT GATCATGGGG
CGGGCGGTGG CCATCCACCC GCTCGCGGTG ATCGTCGGTA TCGCCGCCGG CGTGGTACTC
GCCGGGGTCA CCGGGGCGCT GATCGCGGTG CCGTTGATCG CGGTGCTCAA CACGGCGGTA
CGCCGTCTCG CCGCCCGTAC CGTCCCGGAG ACCCCATCGG ACGCTGTCGT CGTCGCGAGC
AGGGCCCCCT GA
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| Protein sequence | MRERLRHAYQ SVRSRRRSAG LRAGTPATAS PASPRPAPAP PPPPAVGTKT SAPLHSSTTS
RDDADVPHAL RVGAAWSWRL LAIGIVAWAL LRVMGQVRIV IIPLAIALLL SALLAPAVGW
LLRARFPRSL ATAVVLVGGL AAVIGTLTLV VNEFIQGLPV LGEKSSQGVR QIQNWLRSGP
LRLEDEQLDR YINDVEGWLN ENIDGLTSGA LSTAATVAEV LTGTILVLFA TFFFLRDGNR
IWRFLVRLMP VNARWKVDDA GRASWQTLGA YVRATVLVAC IDALGIGIFL VIFEIPFALP
LAALVFLASF IPIIGATLSG GVAVLVALVD SGPITALIIL GVVIGVQQLE GHVLQPLIMG
RAVAIHPLAV IVGIAAGVVL AGVTGALIAV PLIAVLNTAV RRLAARTVPE TPSDAVVVAS
RAP
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