| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0268 |
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| Symbol | |
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| ID | 5056706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 305397 |
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| End bp | 305600 |
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| Gene Length | 204 bp |
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| Protein Length | 67 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640472540 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001157131 |
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| Protein GI | 145592834 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00110044 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGGCACAGG GCACCGTGAA GTGGTTCAAC GCTGAGAAGG GCTACGGCTT CATCGCCGTT
GACGGAGGGC AGGACGTGTT CGTCCATTTC TCCGCTATCG AGATGGATGG CTACAAGGCG
CTGGACGACG GCCAGCGGGT GGAGTTCGAG ATCGCCCAGG GCCAGAAGGG CCCGCAGGCC
GAACGGGTGC GCGTCGTCGC CTGA
|
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| Protein sequence | MAQGTVKWFN AEKGYGFIAV DGGQDVFVHF SAIEMDGYKA LDDGQRVEFE IAQGQKGPQA
ERVRVVA
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