| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0254 |
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| Symbol | |
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| ID | 5056692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 287525 |
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| End bp | 289777 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640472526 |
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| Product | microtubule-severing ATPase |
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| Protein accession | YP_001157117 |
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| Protein GI | 145592820 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.053891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGGAT CGGAACTCAT ACTCACCGCC AGCCGGCAGC CGGCCGCGCT CGACGCCCGA
CGGGGCATCG TGCGGCTGCA CCCGGAGGTG CTCACCGCGC TCGGCATACG CCCCGGCGAC
CCGGTCCGGC TGGCCGGCCG GCGGGTCACC GCCGCACTCG CCGCGGAGAG TGAGCCGGAG
GCCATCCCCG GCCTGCTCTA CGCCGATGAC CTGACGCTGG GCAACCTCGG CCTCCGCGAC
GGCGGTGAGG TCACCGTCGG CCCAACCCCC GTCACCGCCG CCACCCGGGT GGTGCTCACC
GGCGCACCGC AGGTGGTCTC GGCGGTCTCC CCGGAGCTGC TCCGGCTCGC GCTACTCGGC
AAGGTGGTCA CCACCGGTGA CGACGTCTCG CTGCTGCCCC AGGAGGTGCT GCCTCAGGAG
GTGCTGTCCG ACACGGCGTT ACGCGGCCTC CTGACGGCGG CCCGACAGAG CCTGGCCAAC
CGTGTCGGCT ACGCCTGGAC CAGCGCCCTG CTCACCGTCA CCGCCGCCAC GCCGGCGTCG
GCCACGCTGG TCACGATGGA GACCACCGTC GGGTGGGAGC ACGGCCCCGC CACCCACGAC
CAGGCGACGC CCCGGGCGCC CTCCGCCGCC GGGGACCCTC GCCAACCCCG GGCCGCCGGG
GCACGGGATG CGGAGCCAGC CGGAACAACC GACCCGGTGA CGCCCACCGT GGAGGAGCTA
CCGGGGCTAC GGGCCCAGGC CGAGGACCTG ACCGAGCTGC TCGACCTCGG CTTCCACCAC
GGTGCGGTGC TGCGCCGACT CGGCACCACG GTGGCGCTCG GCGTACTGCT CGACGGGCCG
GCCGGGTCCG GCAAGTCCGC GCTCGTGCGC GCGGTCGCCG CCCAGGTCGG CGCACGGGTC
CGGCCGGTCT GGGGGCCAGA GCTTGCCGCG TTGACCAACT CGGCCGCCGC CGAACGGCTG
CGGGCCGCCG CCGCCGCGGT ACGCACCGAC GGACCGGCCG TCCTGCTGGT CACTGACGTG
GAGGCGCTCG CCCCGGCAGC CGCGCCCGGC CCGGTGACCA CCGTCTTCCG CCAGGTGGTC
GCCGAGACCG TCGCGGCCGG GGCCGCCGTG GTGTGCACCA CCAGCCGCCT CGACGCCGTG
GATCCCGCCC TGCGTACCCC GGACCTGCTC TCGCTACGGG TCAGCATCCC GCTCCCGGAC
GCCGCCCTGC GCCAGGAACA GCTTGAGGTG CTGACCCGAC AGGTGTCGCT CGCCGAGGAC
GTACGACTGG ACGAGGTCGC GGCGCGTACG CCCGGTTTCG TCGCCGCCGA CCTGGCCGCG
CTGATCCGCG AAGCGGGTGT CCGCGCCGCC CTGCGACAGA AGACGGTGGA GCGGCCCAGT
ATGACGATGG CCGACCTGGA CGCGGCGCTG GCGGTGGTCC GCCCGACCAC GATGACCGCG
TCGACCCTGG AGCTCGCGTC GGTGACCCTC GACGACGTGG GAGACCTGAC CGAGGTCAAA
CAGACCCTGA CCGAGTCGGT GTTGTGGCCC CTCACCTATC CGGGCACCTT CGCGCGGCTC
GGGGTGCAGC CGCCCCGCGG GGTCCTGCTC TACGGCCCGC CGGGCTGCGG CAAGACGTAC
CTGGTGACTG CGTTGGCCGG TTCGGGCCGG GCGAACGTGC TCTCCGTGAA GGGCGCCGAA
CTGTTGTCGA AGTGGGTGGG CGAGAGTGAG CGCGCGGTAC GCGAGCTGTT CCGCCGGGCC
CGCGAGGCCG CGCCGACGCT GGTCTTCCTG GACGAGGTGG ACGCGCTGGC GCCGGTACGC
GGTCAGGCCA CCGACGGCGG TACCGCCGAC CGGGTGGTGG CCGCCCTCCT CACCGAACTG
GACGGAGTGG AGTCTTTACG CAACGTGGTT GTGGTCGGGG CGACCAACCG GCCAGACCTG
GTCGACCCGG CCCTCCTGCG CCCCGGCCGG ATGGAGCGGT TGGTCTACGT CCCGCCACCA
GACGAGGCGG GACGCGCGGA GATCCTGCGG GCGGCGTCCC GCACCGTGCC GCTGGCGCCG
GAGGTGGACC TCGGCGCGCT CGCCGGAGAC CTGGACGGCT TCTCCGCCGC GGACTGCGCG
GCGCTGGTCC GGGAGGCGGT GCTCGCCGCG ATGCGCGAAT CGCTCGCCGC GGCGACGGTG
ACCACCGCCC ACGTCGCGGT CGCCCGCGCC CGCGTACGCC CCTCCCTGGA CCCGGCCCAG
GTCGCTTGGC TGGCCGCGTA CGCCGCCCAG TGA
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| Protein sequence | MGGSELILTA SRQPAALDAR RGIVRLHPEV LTALGIRPGD PVRLAGRRVT AALAAESEPE
AIPGLLYADD LTLGNLGLRD GGEVTVGPTP VTAATRVVLT GAPQVVSAVS PELLRLALLG
KVVTTGDDVS LLPQEVLPQE VLSDTALRGL LTAARQSLAN RVGYAWTSAL LTVTAATPAS
ATLVTMETTV GWEHGPATHD QATPRAPSAA GDPRQPRAAG ARDAEPAGTT DPVTPTVEEL
PGLRAQAEDL TELLDLGFHH GAVLRRLGTT VALGVLLDGP AGSGKSALVR AVAAQVGARV
RPVWGPELAA LTNSAAAERL RAAAAAVRTD GPAVLLVTDV EALAPAAAPG PVTTVFRQVV
AETVAAGAAV VCTTSRLDAV DPALRTPDLL SLRVSIPLPD AALRQEQLEV LTRQVSLAED
VRLDEVAART PGFVAADLAA LIREAGVRAA LRQKTVERPS MTMADLDAAL AVVRPTTMTA
STLELASVTL DDVGDLTEVK QTLTESVLWP LTYPGTFARL GVQPPRGVLL YGPPGCGKTY
LVTALAGSGR ANVLSVKGAE LLSKWVGESE RAVRELFRRA REAAPTLVFL DEVDALAPVR
GQATDGGTAD RVVAALLTEL DGVESLRNVV VVGATNRPDL VDPALLRPGR MERLVYVPPP
DEAGRAEILR AASRTVPLAP EVDLGALAGD LDGFSAADCA ALVREAVLAA MRESLAAATV
TTAHVAVARA RVRPSLDPAQ VAWLAAYAAQ
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