Gene Strop_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0250 
Symbol 
ID5056688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp284903 
End bp285916 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID640472522 
Producthypothetical protein 
Protein accessionYP_001157113 
Protein GI145592816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0717859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCTCT ACCGTGCGGA ACTACGCCGG CTGGTGCTGC GGCGCCTCAC CCGCTGGGTG 
ACAGTGCTGG GCCTGGTGGT GTTGGCAACG GTGGCCGTCG GGGTCTTTCT GTCGAACCAG
AAGATCGACG ACGCGGCCTG GGCCAAGGCC GAGGTGACCG CCGAGCAACA CTGGCAGCAG
CAGGTGCGCT CGACCGAACA GTTTCGGGCG GAGTGCGAGC AGGCGGCGAT CCGGGGCGAA
CAGGTGGGTA GCTTCCCCTC GGACTGCTCC GAGATCACAC CCCCACCCCG GGATGCCGTT
TCGGCGGACC TGTTCCTGGC GAGCACCTTC GACTTCCGGG AAAGCTTCGG CCAGACGCTG
ACCGCGCTCG CGGCGACCCT CGCCCTGGTC GGTTTCGTGG TGGGCTCCTC CTTCGTGGGG
GCCGAGTGGA ACACCGGCGG CATGATGACC ATGCTGCTCT GGCGGCCGAA GCGGGTCACC
GTCCTGCTGA CCAAGCTGGC CGCCCTCCTC ACCGGGCTGT TGGCGTTGGC GGTCTCCACG
ACGGTGCTCT GGTTCGGCAG CTTCTGGCTG ATCGGCACGA CCCGCGGCAC CACCGAAGGG
ATGACCACCG GCGCCTGGCA GTCCTTCGCC CTGACCGGCC TGCGTGGTGT GGTGCTTGCC
CTGGTCGTCG CCGCGCTCGG CTTCGGGCTG GCCTCGCTCG GCCGACACAC CGCGATGGCG
CTGGGCGGCG TGATCGGGGT GACGGTGGTC GGGCAGTTTG GTCTCGCCGT GCTGCTCAGG
CTGACCGGAG CGACGTTCGT TGAGGCGTGG CTGCTCCCCA CCTACCTGTT CGCCTGGATG
AACAAGGAGG TCATCCTGAA CGACTGGACG GTGTGTCAGT ACAACGCCTT CGGTCTGTGT
GAACCGGCGA CCCTGACCCT CACCTGGCAG CATTCGTTCG GGCTGCTCGC GGCTGGGCTG
GTGCTCATCC TCGGCGGTGC GTGCTGGGCG ATGCGTCGGC GGGACATCTC CTGA
 
Protein sequence
MSLYRAELRR LVLRRLTRWV TVLGLVVLAT VAVGVFLSNQ KIDDAAWAKA EVTAEQHWQQ 
QVRSTEQFRA ECEQAAIRGE QVGSFPSDCS EITPPPRDAV SADLFLASTF DFRESFGQTL
TALAATLALV GFVVGSSFVG AEWNTGGMMT MLLWRPKRVT VLLTKLAALL TGLLALAVST
TVLWFGSFWL IGTTRGTTEG MTTGAWQSFA LTGLRGVVLA LVVAALGFGL ASLGRHTAMA
LGGVIGVTVV GQFGLAVLLR LTGATFVEAW LLPTYLFAWM NKEVILNDWT VCQYNAFGLC
EPATLTLTWQ HSFGLLAAGL VLILGGACWA MRRRDIS