Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0242 |
Symbol | |
ID | 5056680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 275688 |
End bp | 277694 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640472514 |
Product | TrkA domain-containing protein |
Protein accession | YP_001157105 |
Protein GI | 145592808 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.570475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCACA TGACCGGGCC CTTCGATCGT GCATGGTGGA CCGGGCGCCG GCTTCGAGGC AACAGCGACC CCTGGGCCCA CTACGTGGTC TGTGGCCACG ACGCCCTGGC GTACTGGGTG GTCAGGTCGC TGCTCGCCAC CGAGCCGCAG CTCGCCCGGA TCCGGATCAC GCTGGTGGTG CCCGAGCGGC AGCGGACCGA CAGCCCGGAC GGTCGAGATC TCGACGGCAT CGAGGTCATC CGGGCCGACC GGCTCGACGA GGTGACGTTT CGCGATGCCC GCCTGGACCG GGCGGAGGGT TTGGCGCTGC TGCACCAGGA CGACGTGGGC AACATGCACG CGGCGCTCTG TGCGCAGGAG GTGCAGCCGA GGCTGCGGTT GGTGGTCCGG ATGTTCAACA CCAGCCTGGC CAACGGGGTA CGACAGATCT TCCCCGACTC GGCGGTGCTC TCCGACGCCG CGATGGCGGC CCCCGCCTTC GTCGCTGCCG CGCTGGGCGA GGTCGCGCCG GCTCACTTCC GACACGGCGG ACGGACTCTG TACGTGGCCC GCCGCGTCGA TCTTCGAGAC GAGGACATCG TCTGCCCGGT GGCGGATATC CGGGACCCGC GGGAGGTTCG GGTCCTGCCC GCCGACGAGA CCTCCGCCGA CGTGGTGCTC GCCGAGGCGG CCGGTACACC ACCGGGAACC GAGGTGGCAG CGCGCCGACT GCGTCGGGCC CGGCGGTGGC GCCGGCCGGT CACGATGCTG CTCCGGGCGG TCCGGGGCTT CGCCACCCGC AGGATCGGCC TCGCCGTGTT GGTGCTGCTG GCGGTGATCG TCGTGCTCGG CGGCCTCTAC GCCAGCACCG CCGAGGTGAG CTGGGGGGAG GCGCTCTACC TGACCCTGGT CACCGCCCTG AGCGGGCAGG ACCCGGACGC CGCCAAGCCG CTCGGCGAAC AGGTTCTCCA GGTGGTGCTC AATCTCTCCG GCCTGGCGCT GATCCCGTTG GTCACCGCCG TGGTGGTGGA CGGCCTCGTC AACGCCCGGC TGGCGCTCCA CTCCGGGCGG CCCCTGACTG ACCGTTCCGG GCACGTGGTC GTGGTCGGCC TCGGCAACAT CGGCACGCGG GTGACCGCCC AGCTCCGCGA CTTCGGTGTC GAGGTGGTCG CCATCGACAA GAACGCGGAC GCACGGGGTG CCGAGCTGGC CCGGCGGCTC GGCGTGCCGC TGGTGGTGGG GGACGCCTCC ACCGAGGAGA CCCTGCGCGC CGCCTCGGTC GGCACCTGCC AGGCCCTCGT CGTGGTCTCC ACCGACGACG GGGTGAACCT ACGGGCCGCG CTGACGGCCC GCTCCTTCAA CGACGATGTT CAGGTGGTTC TGCGGCTCTT CGACGGGCAC TTCGCCGAGC GCGTCCAGCG GTCCTTCGGC ATCGGCGTCT CGCGGAGCGT GTCGTACCTG GCGGCACCGT CGTTCGCCGG TGCCCTGCTG GACCGTGCCG TCATCGCCAC CATCTCGGTC GGCCGGCACG CCCTGTTGGT CACCGAAGTT CCGGTAGCCG CCGGCTCCTC GCTCGACGGT CAGCCGCTCG CCACCGTTGA CCGCACGGGG AGTGTCCGGC TACTCGCCCA CGCCCGCTCC GGTCAGCGGT ACGAGTGGGA GCTCGACCGG CGGTTAGTGA TCATGGCAGG GGACCGGCTG ACGGTGGTTG CCCGGCGGGC CGGGCTGAAC GCCCTGCTCC GTGAGGCCGG CCCCCTCAAT CCGGAGGTTC CCGCGTCCCC GGATGGTTCG TCCCCGGAGC CCGCATCGAC TCCGGCCGGT TCACCCCCGG TCGGTTCGTC CCCGGAGACC GCGTCACTGC CGCAGCCCGC ATCGCCCCCG GTCGGTTCGT CCCCGGAGGC TCCATCGTCC CCGGAGGTCG CATCACCCTC GGAGGGCTCA TCAGCCCCGG CCGGCCCGCC GCTGCCCCGC CTGCCGGAGG GGGAGGTGGG CGGCTCGGTT GATCAGCGGC CGGTCTCCTC CGAGTAG
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Protein sequence | MRHMTGPFDR AWWTGRRLRG NSDPWAHYVV CGHDALAYWV VRSLLATEPQ LARIRITLVV PERQRTDSPD GRDLDGIEVI RADRLDEVTF RDARLDRAEG LALLHQDDVG NMHAALCAQE VQPRLRLVVR MFNTSLANGV RQIFPDSAVL SDAAMAAPAF VAAALGEVAP AHFRHGGRTL YVARRVDLRD EDIVCPVADI RDPREVRVLP ADETSADVVL AEAAGTPPGT EVAARRLRRA RRWRRPVTML LRAVRGFATR RIGLAVLVLL AVIVVLGGLY ASTAEVSWGE ALYLTLVTAL SGQDPDAAKP LGEQVLQVVL NLSGLALIPL VTAVVVDGLV NARLALHSGR PLTDRSGHVV VVGLGNIGTR VTAQLRDFGV EVVAIDKNAD ARGAELARRL GVPLVVGDAS TEETLRAASV GTCQALVVVS TDDGVNLRAA LTARSFNDDV QVVLRLFDGH FAERVQRSFG IGVSRSVSYL AAPSFAGALL DRAVIATISV GRHALLVTEV PVAAGSSLDG QPLATVDRTG SVRLLAHARS GQRYEWELDR RLVIMAGDRL TVVARRAGLN ALLREAGPLN PEVPASPDGS SPEPASTPAG SPPVGSSPET ASLPQPASPP VGSSPEAPSS PEVASPSEGS SAPAGPPLPR LPEGEVGGSV DQRPVSSE
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